Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5771
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.12
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 31 0.20
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 30 0.36
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.62
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 29 0.62
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.4
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 1.4
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 27 2.5
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.3
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 26 5.8
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 26 5.8
SPAP27G11.15 |slx1||structure-specific endonuclease catalytic su... 26 5.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.8
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 7.7
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 25 7.7
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 7.7
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 25 7.7
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.12
Identities = 42/195 (21%), Positives = 73/195 (37%), Gaps = 11/195 (5%)
Frame = +1
Query: 49 NSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLL---SGRXXXXXXXXXXXX 219
++S P+ T S +T +A+++ + S SP P ++ + ST + G
Sbjct: 82 SASTPIITESTSSTSSASTTGSSS--SPLPSTSTSCTTSTSIPPTGGSSSLSTPITPTVP 139
Query: 220 XIGLNSS----PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTP 387
+S+ PP+ T + + LP + C TS T+ T T P
Sbjct: 140 PTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTS--TSIPPTGGSSSLSTPITPTVPP 197
Query: 388 VPASG---PIPPEDKDVTN-NKKKQRTASSAPKSSWLMPKDRXXXXXXXXXXXXANVSTY 555
S PIPP T+ N T S++ +S +P ST
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLSTPITPTVPPTSTS 257
Query: 556 A*TVSSPVTSAAKSE 600
+ ++ P TS + ++
Sbjct: 258 STSIPIPPTSTSSTD 272
Score = 31.1 bits (67), Expect = 0.15
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 5/149 (3%)
Frame = +1
Query: 61 PLKTASMKTTDNATSSSNVSMES-PQPXSARTVLCSTLL--SGRXXXXXXXXXXXXXIGL 231
P T+S TS+S+ S P P ++ + ST + +G
Sbjct: 253 PTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSS 312
Query: 232 NSSPPSPTHNVPAAMDSLPIP-TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
S+PP P S P+P T T+ST+ TST ++ P
Sbjct: 313 TSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
Query: 409 PPEDKDV-TNNKKKQRTASSAPKSSWLMP 492
P T++ T++S S+ + P
Sbjct: 373 PASTSSTGTSSSPLLSTSTSCTTSTSIPP 401
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 49 NSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLS 177
+SS P+ TAS+ T+ + S+S + SP P ++ T S++LS
Sbjct: 94 SSSTPI-TASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILS 135
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 29.9 bits (64), Expect = 0.36
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 373 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPK 474
S+STP PAS PP ++++K R+ +P+
Sbjct: 619 SSSTPTPASVLAPPSSASLSSSKDANRSVPESPR 652
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 29.1 bits (62), Expect = 0.62
Identities = 32/154 (20%), Positives = 63/154 (40%), Gaps = 3/154 (1%)
Frame = +1
Query: 28 SLQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXXX 207
S+ + +SS PL +++ + ++TSSS S+ S ST S
Sbjct: 158 SISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSS--------STFSSAAPTSTSSSY 209
Query: 208 XXXXXIGLNSSPPSPTHNVPAAMDSLP---IPTPLCATSSTTAXXXXXXXXXXXXAFTST 378
+ +SS PS + + SL IP+ ++SST++ + +S+
Sbjct: 210 LSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS 269
Query: 379 STPVPASGPIPPEDKDVTNNKKKQRTASSAPKSS 480
S+ + +S ++ ++SS+P S+
Sbjct: 270 SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTST 303
Score = 27.9 bits (59), Expect = 1.4
Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 1/145 (0%)
Frame = +1
Query: 49 NSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXXXXXXXXIG 228
+SS+P T+S ++ +++SSS S S T+ S+ S
Sbjct: 279 SSSSPTSTSSTISSSSSSSSSPTSTSS-------TISSSSSSSSSFSSTLSSSSMSSSSS 331
Query: 229 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
+SSP S + + ++ S P + +T+S++ + TS+ST +S
Sbjct: 332 FSSSPTSSSSTISSSSSS-PSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
Query: 409 P-PEDKDVTNNKKKQRTASSAPKSS 480
P ++ +SS+ KSS
Sbjct: 391 SRPASSSSHSSSLSSHKSSSSSKSS 415
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 29.1 bits (62), Expect = 0.62
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 679 SESLYQSSHPRTFSGASHFWLSSL*PSPTWQPRSR 575
++ L +S HP + SG S+ +++S P WQ R R
Sbjct: 728 NDKLIKSIHPGSLSGISNSFVNSKHPIEQWQSRLR 762
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/85 (23%), Positives = 30/85 (35%)
Frame = +1
Query: 238 SPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPE 417
+PP P VP+ +PIPT +++ + S P P+ P P
Sbjct: 1031 APPIP---VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA 1087
Query: 418 DKDVTNNKKKQRTASSAPKSSWLMP 492
+ K A PK S +P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVP 1112
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.9 bits (59), Expect = 1.4
Identities = 26/104 (25%), Positives = 34/104 (32%), Gaps = 1/104 (0%)
Frame = +1
Query: 118 SMESPQPXSARTVLCSTLLSGRXXXXXXXXXXXXXIGLNSSPP-SPTHNVPAAMDSLPIP 294
+ME PQ + V ST S R N++ P T P S P P
Sbjct: 834 NMEEPQHQDSSVVDVSTSASQRGSPVLSDLSKLTGSARNTAEPVENTSAEPIENTSAPTP 893
Query: 295 TPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPEDKD 426
+ T A + STP P P+PP +D
Sbjct: 894 FEIANKQQATEPISAPF------ATETISTPAPVKPPVPPSRRD 931
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 27.1 bits (57), Expect = 2.5
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Frame = +1
Query: 46 PNSSAPLKTASMKTTDNATSSSNVSMESPQ--PXSARTVLCSTLLSGRXXXXXXXXXXXX 219
P SS PL+ S TT ++S++ + SPQ P + + ST S +
Sbjct: 13 PTSSIPLRQMSQPTTSAPSNSASSTPYSPQQVPLTHNSYPLSTPSSFQHGQTRLPPINCL 72
Query: 220 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTA 327
N P P H+ AA S +P AT ST A
Sbjct: 73 AEPFNR--PQPWHSNSAAPAS---SSPTSATLSTAA 103
>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 225
Score = 27.1 bits (57), Expect = 2.5
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -1
Query: 270 GGDIVSWAWGAGVQSY 223
G I+SW+WG G +S+
Sbjct: 140 GSSILSWSWGLGFESF 155
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +1
Query: 238 SPPSPTHNVPAAMDSLPIPT--PLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIP 411
+PP+P +P A+ ++P+P+ P A ++ S+ VP+ P
Sbjct: 1477 APPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPA 1536
Query: 412 PEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
P+ S +SS P++
Sbjct: 1537 PQHPSAAALSSAPADNSMPHRSSPYAPQE 1565
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 3.3
Identities = 42/193 (21%), Positives = 74/193 (38%), Gaps = 7/193 (3%)
Frame = +1
Query: 28 SLQLQAPNSSAPLKTASMKTTD-NATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXX 204
S L + NS++ +S T N+T+S++VS +P ++ + S++ S
Sbjct: 372 STPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSS----TPLSS 427
Query: 205 XXXXXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTS- 381
+S+P S ++ A S TPL + +STTA + T+TS
Sbjct: 428 ANSTTATSASSTPLSSVNSTTATSAS---STPLSSVNSTTATSASSTPLTSVNSTTATSA 484
Query: 382 -----TPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKDRXXXXXXXXXXXXANV 546
T V ++ +T+ T+ S+ S+ AN
Sbjct: 485 SSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANS 544
Query: 547 STYA*TVSSPVTS 585
+T S+P+TS
Sbjct: 545 TTATSASSTPLTS 557
Score = 26.2 bits (55), Expect = 4.4
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Frame = +1
Query: 52 SSAPLKTASMKTT--DNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXXXXXXXXI 225
+SA ++S+ +T N+ +SS+++ S ++ T S++ S
Sbjct: 204 TSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTA 263
Query: 226 GLNSSPPSPT--HNVPAAM-DSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPA 396
++S S + +N + + S P TPL + +STTA TS ++
Sbjct: 264 ATSASATSSSAQYNTSSLLPSSTPSSTPLSSANSTTA------TSASSTPLTSVNSTTTT 317
Query: 397 SGPIPPEDKDVTNNKKKQRTASSAPKSS 480
S P + N + SS P SS
Sbjct: 318 SASSTPLSSVSSANSTTATSTSSTPLSS 345
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 488 INQLLFGALEAVLCFFLLFVTSLSSG 411
I LE +LCFFL++ T+ S G
Sbjct: 47 IRDSFLSQLENILCFFLVYRTTYSFG 72
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 406 IPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
+PPE +++ + +KQ+ K SWL +D
Sbjct: 162 LPPEHRNIWFDMEKQKKEELKNKHSWLYNED 192
>SPAP27G11.15 |slx1||structure-specific endonuclease catalytic
subunit |Schizosaccharomyces pombe|chr 1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +3
Query: 294 DPSVCNIFYNCIEGEATEVKC 356
+P CN+ Y CIE + C
Sbjct: 176 EPVKCNLCYECIESDELRANC 196
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 5.8
Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
Frame = +1
Query: 232 NSSPPSPTHNVP-AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
+SS P + P ++ S P +TSS A STS+ P+S I
Sbjct: 472 SSSSVQPQSSTPISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSII 531
Query: 409 PPEDKDVTNNKKKQRTASSAPKSS 480
V ++ T+SS+ SS
Sbjct: 532 SSPMTSVLSSSSSIPTSSSSDFSS 555
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 491 GINQLLFGALEAVLCFFLLFVTSLSSGGIGPDAG 390
GI +GA +L F F S+ G PDAG
Sbjct: 480 GIYGACYGAFIIILVFITEFYVSIFPIGASPDAG 513
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.4 bits (53), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 60 PAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRK 182
P Y DD ++ E V G T C ++FD TIR+
Sbjct: 488 PTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIFDMTIRE 528
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 91 DNATSSSNVSMESPQPXSARTV 156
D SSSNVS++S QP S V
Sbjct: 76 DAVASSSNVSLQSQQPLSKPVV 97
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 370 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSS 480
TSTSTP A+ P P V K + +++ A +S
Sbjct: 77 TSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTS 113
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.120 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,796,930
Number of Sequences: 5004
Number of extensions: 59973
Number of successful extensions: 202
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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