Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5771
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1816 + 40086972-40087820,40088324-40088459,40088544-400886... 33 0.21
12_02_0431 - 19000267-19000719 32 0.48
07_03_0690 - 20714691-20714922,20715498-20715572,20715914-207160... 31 0.84
03_05_0768 + 27575303-27575980,27576427-27576543 31 1.1
05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320 30 1.5
08_02_1012 + 23550314-23551504 30 2.0
05_03_0458 + 14280953-14281866,14281964-14282912 30 2.0
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 29 3.4
10_06_0145 + 11215895-11216860 29 3.4
05_06_0098 + 25560158-25560925 26 4.3
12_02_0233 - 16023062-16023253,16023528-16023609,16023699-160238... 29 4.5
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 29 4.5
06_03_1146 - 28004896-28005554,28005664-28005844 29 4.5
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 29 4.5
03_06_0426 + 33855701-33856135 29 4.5
07_03_1107 - 24024387-24024497,24025799-24026410 24 5.6
12_02_0766 - 22982606-22983288,22984352-22984706 28 6.0
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 28 6.0
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 28 6.0
12_01_1105 + 11672118-11673245 28 6.0
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 28 6.0
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 28 6.0
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 28 6.0
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 28 6.0
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 28 6.0
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 28 6.0
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 28 6.0
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 28 6.0
04_01_0171 - 1927238-1928728,1928819-1929016 28 6.0
02_03_0264 + 17059279-17059638,17060226-17060260,17060307-170603... 28 6.0
01_01_0242 + 1997427-1997429,1997893-1998580,2000199-2000234,200... 28 6.0
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 28 7.9
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 28 7.9
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 28 7.9
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 28 7.9
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 28 7.9
08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435... 28 7.9
07_03_1091 + 23899825-23900649,23900750-23900998,23901104-239011... 28 7.9
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 28 7.9
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 28 7.9
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 28 7.9
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 28 7.9
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 28 7.9
>01_06_1816 +
40086972-40087820,40088324-40088459,40088544-40088640,
40088742-40088842,40089149-40089312,40089407-40089595,
40089904-40090025,40090200-40090242
Length = 566
Score = 33.1 bits (72), Expect = 0.21
Identities = 31/114 (27%), Positives = 50/114 (43%)
Frame = -2
Query: 614 FVITLSDLAAEVTGLDTVQAYVETLAVVGVGELGVSDDLSLGINQLLFGALEAVLCFFLL 435
F +TL+ A G + A+ + A V + ++D L++ LL A A + +
Sbjct: 407 FCVTLAASLAARHGATAMAAF-QICAQVWLASSLLADGLAVAGQALLASAF-AKKDHYKV 464
Query: 434 FVTSLSSGGIGPDAGTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGMGKESI 273
VT+ + G G+ + AG G FT DA V HRGV +G ++
Sbjct: 465 AVTTARVLQLAVVLGVGLTAFLAAGMWFGAGVFTSDAAVISTIHRGVPVGVAAV 518
>12_02_0431 - 19000267-19000719
Length = 150
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = -1
Query: 327 CSCRRCC----TQRGRDGQRIHCGGD--IVSWAWGAG 235
C C C +RG DG+ + CGGD +VS+ GAG
Sbjct: 96 CCCVSACGGRRRRRGSDGEEVCCGGDGPVVSYRGGAG 132
>07_03_0690 -
20714691-20714922,20715498-20715572,20715914-20716006,
20716177-20716209,20717521-20717710,20717992-20718061,
20718215-20718370,20718529-20718555
Length = 291
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -1
Query: 522 GTWGERRSVLGHQPAALWGTRSRPLFFFVVRYILVF 415
GT G + LG QPAA W R +FFF Y ++
Sbjct: 118 GTPGGKSRRLGRQPAAPWLDPRRVVFFFATLYRAIY 153
>03_05_0768 + 27575303-27575980,27576427-27576543
Length = 264
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/66 (37%), Positives = 32/66 (48%)
Frame = -2
Query: 467 ALEAVLCFFLLFVTSLSSGGIGPDAGTGVLVEVKAGGTLDLGGFTFDAVVEDVAHRGVGM 288
A+ V F+ TS S+GG G DA GV VEV + G D GG A +E+
Sbjct: 31 AVTVVTTRFIERTTSSSAGGGGLDACPGVRVEVISDGH-DEGGVASAASLEEYLATLDAA 89
Query: 287 GKESIA 270
G S+A
Sbjct: 90 GAASLA 95
>05_03_0059 + 7900544-7900673,7900774-7901027,7901949-7902320
Length = 251
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 238 WSSVLSPQSTLKGWSHLLIFLIVGSNTRPSG 146
++++L P+S++ G+ LL LIVG+NT G
Sbjct: 160 YATILDPRSSVPGFGPLLTGLIVGANTIAGG 190
>08_02_1012 + 23550314-23551504
Length = 396
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Frame = +1
Query: 232 NSSPPSPTHNVPAAMDSLPI---PTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASG 402
+SS SPT PAA+ P+ PL A S P PA+
Sbjct: 305 SSSSSSPTKQAPAALGFYPMGPYSLPLPAQGDAAEGNAAVGSGDGTVTAPSPPPPPPAAA 364
Query: 403 PIPPEDKDV-TNNKKKQRTASSAPK 474
P+P + K V +K+ R SS K
Sbjct: 365 PLPVKPKLVKLGARKRGRPKSSKNK 389
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 241 PPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVP 393
PPSPT + P+A P+PTP A+SS + F S+S+P P
Sbjct: 94 PPSPTTS-PSASSLPPVPTPRSASSSKCS---APTSAQTPTRFLSSSSPPP 140
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSSSNKQPGASSEETWRTPSD 42
>10_06_0145 + 11215895-11216860
Length = 321
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/94 (23%), Positives = 33/94 (35%)
Frame = +1
Query: 19 RRQSLQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXX 198
R + L A + L+ + T D A +++ S + P S R V
Sbjct: 187 RHHAPALSASVDAKILQATTTTTADTAAAAAPASTNTTPPPSPRVVKTEPGCCSVSEAST 246
Query: 199 XXXXXXXXIGLNSSPPSPTHNVPAAMDSLPIPTP 300
+ S PSPT + AA + P P P
Sbjct: 247 TTTADAADVSSTGSSPSPTSSNQAATATPPAPRP 280
>05_06_0098 + 25560158-25560925
Length = 255
Score = 26.2 bits (55), Expect(2) = 4.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 241 PPSPTHNVPAAMDSLPIPT 297
PPSP VP +D+ P PT
Sbjct: 47 PPSPRTVVPRTIDTTPFPT 65
Score = 21.0 bits (42), Expect(2) = 4.3
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 46 PNSSAPLKTASMKTTDNATSSSNVSMESPQP 138
PNS + ++S ++ A +SS+ S P P
Sbjct: 5 PNSPSSSTSSSSPSSAAAAASSSPSSHRPPP 35
>12_02_0233 -
16023062-16023253,16023528-16023609,16023699-16023809,
16023890-16024141,16024227-16024580,16024893-16025548,
16025554-16026459,16026550-16026747
Length = 916
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNN--KKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N KQR ASS + +W P D
Sbjct: 6 VPSNAPIAPQEGNTPQNSGSNKQRDASS--EETWRTPSD 42
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 241 PPSPTHNVPAAMDSLPIPTPLC 306
PP P H PAA+ LP+P P C
Sbjct: 4 PPPPPH--PAALLPLPLPLPFC 23
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 235 SSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPAS-GPIP 411
SSPPSP PAA P+P+ T S + T +S P PA+ P P
Sbjct: 162 SSPPSPA---PAAATPSLAPSPVATTPSPSPSVSPMAPAPAPTTSTPSSPPAPAAMAPSP 218
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNASQNSGSNKHPGASSEETWRTPSD 42
>03_06_0426 + 33855701-33856135
Length = 144
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 543 VGSRWGGGTWGERRSVLGHQP 481
VG GGG W RR GH+P
Sbjct: 114 VGGSGGGGAWRRRRRSRGHRP 134
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 23.8 bits (49), Expect(2) = 5.6
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +1
Query: 40 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTV 156
+AP + AP K K+T + + +P P S+ V
Sbjct: 76 EAPTTPAPTKAPPTKSTKAPAPAPKAAKATPPPASSPPV 114
Score = 23.0 bits (47), Expect(2) = 5.6
Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +1
Query: 235 SSPPSPTHNVPAAMDSLP-IPTP 300
+SPPSP PA + + P P P
Sbjct: 119 ASPPSPAAEAPATIPTKPDAPAP 141
>12_02_0766 - 22982606-22983288,22984352-22984706
Length = 345
Score = 28.3 bits (60), Expect = 6.0
Identities = 23/71 (32%), Positives = 26/71 (36%)
Frame = +1
Query: 268 AAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPIPPEDKDVTNNKKK 447
AA + P P PL A A T PVP S P P KDV +
Sbjct: 14 AAALTTPPPPPLPPARRLVAAAAGGDLSLAMSAATG-EYPVPVSPPYPAASKDVELRRAM 72
Query: 448 QRTASSAPKSS 480
+A SA SS
Sbjct: 73 TASARSAAYSS 83
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>12_01_1105 + 11672118-11673245
Length = 375
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/71 (23%), Positives = 27/71 (38%)
Frame = +3
Query: 462 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEESQKCDAPE 641
E P+E++ + Q I HPK +D Y C D+ G+++ + P
Sbjct: 306 EDPEERIFETQEHITVHPKTCEDHDDGIPYSCPT-TNTMDIATTYNAGFSQFAPTSLFPN 364
Query: 642 NVRGCEDWYKD 674
G W D
Sbjct: 365 PAEGTGGWLDD 375
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPDTSSEETWRTPSD 42
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPDASSEETWRTPSD 42
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPDASSEETWRTPSD 42
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWRTPSD 42
>04_01_0171 - 1927238-1928728,1928819-1929016
Length = 562
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPDASSEETWRTPSD 42
>02_03_0264 +
17059279-17059638,17060226-17060260,17060307-17060385,
17060580-17061123,17061328-17061404
Length = 364
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 166 SNTRPSGQXLVVATPSTHSKNLSHCLSSSYWPSLAGHLNWALAIAATAVETSSLS 2
SNT S + + S + +SH L SS+ P+L G + +L A+ +++ +S S
Sbjct: 277 SNTPTSVKVATAHSKSCCTITMSHLLKSSFKPTLTGEAS-SLRAASASIQKNSQS 330
>01_01_0242 +
1997427-1997429,1997893-1998580,2000199-2000234,
2000786-2001114,2001178-2001855
Length = 577
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 227 D*TPAPQAQLTMSPPQWILCPSRPLC 304
D PA LT++PP W+ P RP C
Sbjct: 18 DCEPATCGNLTINPPFWLDEPGRPPC 43
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIVPQEGNAPQNSGSNKQPDASSEETWRTPSD 42
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 262 HCELGLGGWSSVLSPQSTLKGWS--HLLIFLIV 170
HCE G+ WS +LS T KG S + LI LI+
Sbjct: 1495 HCEEGILSWSGILSLLITRKGNSDGNDLIILII 1527
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKQPGASSEETWHTPSD 42
>09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 262 HCELGLGGWSSVLSPQSTLKGWS--HLLIFLIV 170
HCE G+ WS +LS T KG S + LI LI+
Sbjct: 1080 HCEEGILSWSGILSLLITRKGNSDGNDLIILII 1112
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSD 42
>08_01_0501 +
4345522-4345720,4346598-4347167,4347294-4347366,
4351133-4353092,4353465-4353840,4353932-4354326,
4354597-4354765,4355444-4355518,4357699-4357826,
4357988-4358213,4358290-4358417,4358505-4358768
Length = 1520
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 551 VETLAVVGVGELGVSDDLSLGINQLL 474
V+ L+VVG G LG++DD S QL+
Sbjct: 245 VKVLSVVGSGGLGITDDTSEDERQLI 270
>07_03_1091 +
23899825-23900649,23900750-23900998,23901104-23901195,
23901413-23902193
Length = 648
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 496 PWASTSCSLGHSKPSFVFFCCSLHPCLPAESGQTQVPEYSSK 371
P S SL SKP FCCS C ++ + + SS+
Sbjct: 480 PTESPKLSLAESKPMTPLFCCSKPKCNCSKRSSRKASDGSSQ 521
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSD 42
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSD 42
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 312 CCTQRGRDGQRI 277
CCT+RGRDG R+
Sbjct: 116 CCTKRGRDGDRL 127
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSD 42
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 388 VPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
VP++ PI P++ + N + ++ + +W P D
Sbjct: 6 VPSNAPIAPQEGNAPQNSGSNKHPGASSEETWRTPSD 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.120 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,707,510
Number of Sequences: 37544
Number of extensions: 513797
Number of successful extensions: 1906
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -