Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5771
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 1e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 1e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 44 1e-04
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 40 0.002
Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical p... 37 0.015
U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription f... 37 0.015
U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein ( Caeno... 37 0.015
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 34 0.11
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 34 0.11
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 32 0.44
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 32 0.44
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 31 1.0
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 2.3
AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lecti... 29 2.3
Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.1
Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical p... 29 4.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.1
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 4.1
AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box transcr... 29 4.1
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 28 5.4
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 5.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 5.4
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 28 5.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 5.4
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 5.4
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 5.4
U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 28 5.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.1
U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defecti... 28 7.1
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 28 7.1
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 28 7.1
U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical pr... 27 9.4
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 27 9.4
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 59.3 bits (137), Expect = 3e-09
Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 2/198 (1%)
Frame = +3
Query: 69 DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCGDRTELQPP 245
DG + FF C +G+A CP LVF+P I+ CD P NV DC +++E
Sbjct: 182 DGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPA---ISSCDWPKNVMDCSEKSE---- 234
Query: 246 KPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG 425
KP + C +G+F+ S + F C G + C GL F E + C + +
Sbjct: 235 KPQN-CGEVDGYFSFGRCS--SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDE-- 289
Query: 426 CNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDC-QRFYVCLNGVEPRDLGCQVGE 602
C+ + + ++ E L + DC R C NG E C
Sbjct: 290 CDLESSGFMENYKA-SEALTPCTNM----DNGLYALDCTPRVLSCQNGRE-NIFECPPSL 343
Query: 603 GYNEESQKCDAPENVRGC 656
+NE S CD PE C
Sbjct: 344 VFNENSLICDYPETSLKC 361
Score = 52.8 bits (121), Expect = 2e-07
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 5/203 (2%)
Frame = +3
Query: 66 KDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPP 245
KDG Y + C G C L++DPT +K C +D
Sbjct: 123 KDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKK---CSWKGMID---------- 169
Query: 246 KPNSQCPRRNGFFAHPDPSV----C-NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 410
+C + +G + D ++ C N+F++C EG A C A L F+ +C WP +
Sbjct: 170 ----ECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKN 225
Query: 411 AGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGC 590
C+E+ +K ++ C G++ + F F C NG+ P + C
Sbjct: 226 V--MDCSEKSEKPQN---C---------GEVDGY--FSFGRCSSSFSACTNGI-PIVMFC 268
Query: 591 QVGEGYNEESQKCDAPENVRGCE 659
G ++E++Q CD NV C+
Sbjct: 269 PDGLMFSEKNQMCDYEWNVDECD 291
Score = 43.6 bits (98), Expect = 1e-04
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Frame = +3
Query: 57 CPAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVD-C----- 218
C DG + R F C +G+ CPDGL+F K CD +NVD C
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFS---EKNQMCDYEWNVDECDLESS 295
Query: 219 GDRTELQPPKPNSQCPRR-NGFFA-HPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGT 392
G + + + C NG +A P V +C G +C L F+E S
Sbjct: 296 GFMENYKASEALTPCTNMDNGLYALDCTPRV----LSCQNGRENIFECPPSLVFNENSLI 351
Query: 393 CVWPDSA 413
C +P+++
Sbjct: 352 CDYPETS 358
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 69 DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCGDRTE 233
DG Y +F CV G A CP+ LV+ + + CD NV +CG+ E
Sbjct: 30 DGMYPLGACEPRFLACVSGEARYMDCPEDLVYH---KNLEFCDWRHNVFECGEEGE 82
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +3
Query: 531 NDCQR-FYVCLNGVEPRDLGCQVGEGYNEESQKCDAPENVRGCED 662
++C F+ C G+ R C +N CD P+NV C +
Sbjct: 188 SECSNVFFSCSEGIAHRR-NCPANLVFNPAISSCDWPKNVMDCSE 231
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 57.2 bits (132), Expect = 1e-08
Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNX-CPDGLVFDPTIRKINKCDQPFNVDCGDRT 230
C K DG Y ++R C +C G + C L F+ + KCD P V G
Sbjct: 1182 CDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFN---QLTGKCDYPQKVS-GCEN 1237
Query: 231 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 410
Q N +C F A D + C +FY C+ G + C +G F+ C WP +
Sbjct: 1238 HGQT---NGECSEHGSFIA--DANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSA 1292
Query: 411 AGRQGCNEQQKKTKDGF 461
C+ Q + +
Sbjct: 1293 V--PSCSGQASDSNSSY 1307
Score = 39.1 bits (87), Expect = 0.003
Identities = 44/200 (22%), Positives = 70/200 (35%), Gaps = 14/200 (7%)
Frame = +3
Query: 105 FFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVDCGDRT------ELQPPKPNSQCP 266
+ EC D C G +FD N+C + CG ++ P P
Sbjct: 1047 YLECTDAGNVEKLCRIGKLFDS---HSNRCVP--RIGCGKEAIRDAIKDMIATTPAPAQP 1101
Query: 267 RR-NGFFAHPDPS------VCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQ 422
++ G AH D VC+ Y C G + +C+ F C+ +S
Sbjct: 1102 KQFEGRCAHVDGEAVFSIGVCSSKYLRCSYGASKLQQCSEDRVFSNDKLECIVRESVS-- 1159
Query: 423 GCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGE 602
C + + + +Q G+ + + DC C G CQ
Sbjct: 1160 ACTVPKNPSIKKYYTSNDQSAFCDGK--EDGLYRNERDCSAILQCFGGELFEHPSCQSSL 1217
Query: 603 GYNEESQKCDAPENVRGCED 662
+N+ + KCD P+ V GCE+
Sbjct: 1218 AFNQLTGKCDYPQKVSGCEN 1237
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +3
Query: 54 KCPAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQP 203
+C D C+ F+ CV G CP G VF+P ++ CD P
Sbjct: 1244 ECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPL---LSVCDWP 1290
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 45 AQFKCPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINK-CDQ 200
A+F C +K DG Y ++F CV G A CPD LVF+ + + CD+
Sbjct: 95 AEFDCTSKQDGIYSIGCS-NQFISCVAGGAYMAKCPDSLVFNERTQDCRESCDE 147
Score = 32.7 bits (71), Expect = 0.25
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 6/159 (3%)
Frame = +3
Query: 45 AQFKCPAKDGQYEDDRQCDKFFE-CVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVDCG 221
A +CPA C + + CV+GV C D VF + D+
Sbjct: 27 AATECPAYFNGNIAGNACSREYSICVNGVRQAATCSDDSVFYED--ECVPVDESPECRVD 84
Query: 222 DRTELQP-PKPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 395
+ TE P C +++G ++ N F +C+ G A KC L F+E + C
Sbjct: 85 ENTEEDDTPYAEFDCTSKQDGIYSI---GCSNQFISCVAGGAYMAKCPDSLVFNERTQDC 141
Query: 396 VWPDSAGRQGCNEQQKKTKDG---FECPKEQLVDAQGQI 503
R+ C+E ++ T +E +E +A G+I
Sbjct: 142 -------RESCDEVKQDTTTAPQVYEDGEEGYGEASGEI 173
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 525 HPNDCQRFY-VCLNGVEPRDLGCQVGEGYNEESQKCDAPENV--RGCED 662
H C FY VC +G CQ+GEGY+ Q C + R C++
Sbjct: 894 HGTGCSSFYFVCSHGRLISSGNCQLGEGYDPSVQGCRTFSEIPARACDE 942
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 42 SAQFKCPA-KDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFD 167
S F C +DG Y D D F+ C + + CP G VF+
Sbjct: 188 SIDFDCNGLEDGNYADGCN-DVFYSCSNNMVFQRYCPPGTVFN 229
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.4 bits (115), Expect = 1e-06
Identities = 59/219 (26%), Positives = 82/219 (37%), Gaps = 19/219 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 230
C K DG + + F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 231 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 410
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 411 AGR----QGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GV 569
G + + E E +A G+ N C L+ G
Sbjct: 356 VSECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGC 415
Query: 570 EPRDLGCQVGE----------GYNEESQKCDAPENVRGC 656
PR L CQ G +N++S CD P+ C
Sbjct: 416 SPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 534 DCQ-RFYVCLNGVEPRDLGCQVGEGYNEESQKCDAPENVRGCE 659
+C+ +F C G+ R + C YNE CD NV GCE
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCE 77
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.4 bits (115), Expect = 1e-06
Identities = 59/219 (26%), Positives = 82/219 (37%), Gaps = 19/219 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 230
C K DG + + F C G+A CP LVF+PTI CD P +V +C
Sbjct: 247 CEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTIL---VCDWPRDVAECAGL- 302
Query: 231 ELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDS 410
P P C +G+F+ S + F C G A + C AGL F E + C + +
Sbjct: 303 ----PTPQPTC-EEDGYFSFGQCS--SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESN 355
Query: 411 AGR----QGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPK-FPHPNDCQRFYVCLN--GV 569
G + + E E +A G+ N C L+ G
Sbjct: 356 VSECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQCVGLDNGLHAIGC 415
Query: 570 EPRDLGCQVGE----------GYNEESQKCDAPENVRGC 656
PR L CQ G +N++S CD P+ C
Sbjct: 416 SPRVLSCQNGHVDIFECPSSLVFNDQSLICDYPQTSLKC 454
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 534 DCQ-RFYVCLNGVEPRDLGCQVGEGYNEESQKCDAPENVRGCE 659
+C+ +F C G+ R + C YNE CD NV GCE
Sbjct: 36 ECEPQFLTCSGGIA-RIMDCPADLIYNEPLLICDWRHNVIGCE 77
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Frame = +3
Query: 57 CPAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVDCGDRTEL 236
CP DG Y K+ +CV+ V CP+GL FD + + + GDR L
Sbjct: 43 CPDGDGLYAVGCS-SKYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCATGDRVTL 101
Query: 237 --QPPKPNSQC-PRRNGFFAHPDPSVCN-IFYNCIEGEATEVKC 356
+ + C R +G +A D +VCN +Y C G + KC
Sbjct: 102 NVRQKAVSINCVGRLSGDYA-LDKTVCNENYYQCANGISYMRKC 144
Score = 36.3 bits (80), Expect = 0.020
Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 3/209 (1%)
Frame = +3
Query: 51 FKCPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNVD-CGD 224
F C + DG Y + +C+ G + + C GL ++ K C VD C
Sbjct: 887 FSCSGRPDGIYALPYCSQDYVQCMQGRSLISSCAPGLFYN---EKNGMCAYKHTVDTCKI 943
Query: 225 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFY-NCIEGEATEVKCTAGLHFDEYSGTCVW 401
N+ + +G+++ + C+ +Y +CI+ + ++ C L F + S CV+
Sbjct: 944 GKGSDIIDSNACFGKSDGYYS----AGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVF 999
Query: 402 PDSAGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRD 581
P A + C+ + P + + + H K P+ + VC NG
Sbjct: 1000 PIDA--KECSIATTLDRTPPAVPSD-FCTIRSNGLHHLKMCSPH----YIVCDNG-RAFS 1051
Query: 582 LGCQVGEGYNEESQKCDAPENVRGCEDWY 668
C YN ++Q C+ + C + Y
Sbjct: 1052 GTCIAPLVYNGDTQTCNYKSTNKDCGNDY 1080
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 309 NIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPK 473
++FY C G+ C A L F+ Y G C + S + C Q T + PK
Sbjct: 589 SVFYICANGQVVATTCPANLIFNPYVGECDY--STNVRDCQGYQPTTTPSYSYPK 641
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 33 AIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFD 167
A F C K +G+Y + FF C DG A N CP LVF+
Sbjct: 425 AEVKVDFDCTGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFN 470
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 534 DCQRFYVCLNGVEPRDLGCQVGEGYNEESQKCDAPENVRGCEDW 665
DC+ +Y+ N E C G Y++ + +CD E+V C ++
Sbjct: 799 DCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEY 842
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +3
Query: 36 IASAQFKCP-AKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV 212
IA F C DG + F+ C +G CP L+F+P + +CD NV
Sbjct: 567 IALDDFSCKHLADGNHASGLCKSVFYICANGQVVATTCPANLIFNP---YVGECDYSTNV 623
Query: 213 -DC 218
DC
Sbjct: 624 RDC 626
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 534 DCQRFYVCLNGVEPRDLGCQVGEGYNEESQKCDAPENVRGCEDW 665
DC+++ + + C G Y+ KCD ENV GC ++
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVEGCPEY 743
Score = 31.5 bits (68), Expect = 0.58
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Frame = +3
Query: 57 CPAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKC----------DQPF 206
C +DG + F C +GV C D LVFD + D P
Sbjct: 353 CKNRDGIFGIKECHASFLSCDNGVGRVIQCADNLVFDTRVSACEFAAICLEPRKPEDVPV 412
Query: 207 NVDCGDRTELQPP--KPNSQCP-RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFD 377
+ G +P K + C + NG + + F+ C +G A C L F+
Sbjct: 413 LYNHGGAYNERPAEVKVDFDCTGKPNGKYI--KEACTKSFFTCHDGRAFANDCPGDLVFN 470
Query: 378 EYSGTC 395
+ +GTC
Sbjct: 471 KATGTC 476
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +3
Query: 69 DGQYEDDRQCDKFF-ECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DC----GDRT 230
D + D+ +C +F +C +G CP+ L++ + N CD P +V DC G T
Sbjct: 208 DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIY---VLDQNLCDFPESVKDCPEYNGSET 264
Query: 231 ELQPPK 248
+ PK
Sbjct: 265 SYRAPK 270
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +3
Query: 18 STAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCD 197
+T + FKC KDG + C KF CV+G++ CP+GL F CD
Sbjct: 553 TTRAPTTTTPAFKC-TKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTM---MCD 608
Query: 198 QPFNVDC 218
+P C
Sbjct: 609 RPDPSKC 615
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Frame = +3
Query: 267 RRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKK 446
+ +GF+ P+ + C +F C+ ++ + C +GL +YS + + ++ GC+ +
Sbjct: 484 KSDGFY--PNSNNCGLFVLCLSSKSYSMSCPSGL---QYSASLKYCTTSTASGCSVTTTR 538
Query: 447 TKDGF-ECPKEQLVDAQGQIVAHPKFPH--------PNDCQRFYVCLNGVEPRDLGCQVG 599
+ + P F P+DC +F C+NG+ + C G
Sbjct: 539 APTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFGVPSDCLKFIRCVNGIS-YNFECPNG 597
Query: 600 EGYNEESQKCDAPE 641
++ ++ CD P+
Sbjct: 598 LSFHADTMMCDRPD 611
Score = 37.1 bits (82), Expect = 0.012
Identities = 36/147 (24%), Positives = 50/147 (34%), Gaps = 19/147 (12%)
Frame = +3
Query: 24 AVAAIASAQFKCPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQ 200
A AS C K DG Y + C F C+ + + CP GL + +++ C
Sbjct: 470 ATTTTASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLK---YCTT 526
Query: 201 PFNVDCGDRTELQPPKPNSQCP------------------RRNGFFAHPDPSVCNIFYNC 326
C T P P ++GFF PS C F C
Sbjct: 527 STASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTPAFKCTKDGFFG--VPSDCLKFIRC 584
Query: 327 IEGEATEVKCTAGLHFDEYSGTCVWPD 407
+ G + +C GL F + C PD
Sbjct: 585 VNGISYNFECPNGLSFHADTMMCDRPD 611
>Z71265-6|CAA95837.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 229 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 409 PPEDKDVTNNKKKQRTASSAPKSS 480
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z71258-17|CAA95787.1| 399|Caenorhabditis elegans Hypothetical
protein M05B5.5a protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 229 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 409 PPEDKDVTNNKKKQRTASSAPKSS 480
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U30248-1|AAC13874.1| 399|Caenorhabditis elegans transcription
factor E12/47 homolog protein.
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 229 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 409 PPEDKDVTNNKKKQRTASSAPKSS 480
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>U13614-1|AAA21347.1| 399|Caenorhabditis elegans protein (
Caenorhabditis elegansN2 basic-helix-loop-helix
transcription factor E12/47homolog mRNA, complete cds.
).
Length = 399
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 229 LNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTSTSTPVPASGPI 408
LN PP T ++ + LP P +S A A +STST P++ P
Sbjct: 52 LNPYPPMQTTDIDYSSAFLPTHPPTETPASVAAPTSATSDIKPIHATSSTSTTAPSTAPA 111
Query: 409 PPEDKDVTNNKKKQRTASSAPKSS 480
P DV K A+++ ++S
Sbjct: 112 PTSTTDVLELKPTTAPATNSAETS 135
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.020
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCGDRT 230
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 231 ELQPPKPNSQCPRRNGFFAHPDPSVC 308
+ + NG F P+ + C
Sbjct: 118 QDVTSTQEAIFICENGLFFSPEQARC 143
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCG--- 221
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 222 -DRTELQPPKPNSQ 260
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPT------IRKINKCDQPFNVD 215
C K DG Y D + C +G CP L FD + + +C D
Sbjct: 214 CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTNGSGND 273
Query: 216 CGDRTELQPPKPNSQCPRRNGF 281
G E P+ + + P NG+
Sbjct: 274 EGSADE-TTPESSGEMPYSNGY 294
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPTIRKINKCDQPFNV-DCG--- 221
C K DG Y +F C G++ CP L++DP +I C+ +NV CG
Sbjct: 61 CSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDP---RIVACEYSYNVPQCGGVP 117
Query: 222 -DRTELQPPKPNSQ 260
D T Q P+ +
Sbjct: 118 QDVTSTQEAYPSEE 131
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Frame = +3
Query: 57 CPAK-DGQYEDDRQCDKFFECVDGVATTNXCPDGLVFDPT------IRKINKCDQPFNVD 215
C K DG Y D + C +G CP L FD + + +C D
Sbjct: 214 CVGKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTNGSGND 273
Query: 216 CGDRTELQPPKPNSQCPRRNGF 281
G E P+ + + P NG+
Sbjct: 274 EGSADE-TTPESSGEMPYSNGY 294
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.44
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Frame = +3
Query: 93 QCDKFF---ECVDGV---ATTNXCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 254
+CD F C DG+ + CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 255 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 425
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 426 CNEQQKKTKDGFECPKE 476
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.9 bits (69), Expect = 0.44
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 9/137 (6%)
Frame = +3
Query: 93 QCDKFF---ECVDGV---ATTNXCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPN 254
+CD F C DG+ + CP F R KC + + C + T
Sbjct: 685 RCDPVFGYCTCPDGLYGQSCEKPCPH-FTFGKNCRFPCKCARENSEGCDEIT-------- 735
Query: 255 SQCPRRNGFFAHPDPSVCNI-FYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQG-- 425
+C + G++ H +C+ + G A + C AG+ D +G C AG QG
Sbjct: 736 GKCRCKPGYYGHHCKRMCSPGLFGA--GCAMKCSCPAGIRCDPVTGDCTKKCPAGYQGNL 793
Query: 426 CNEQQKKTKDGFECPKE 476
C++ G++C ++
Sbjct: 794 CDQPCPAGYFGYDCEQK 810
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 291 PDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTC 395
PD C FY C G T+ C G +D++ TC
Sbjct: 167 PDVYNCKNFYQCASGLWTQRSCGEGTIWDQHKLTC 201
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 2/100 (2%)
Frame = +3
Query: 39 ASAQFKCPAKDGQYEDDRQCDKFFECVD--GVATTNXCPDGLVFDPTIRKINKCDQPFNV 212
+S QF C K E R+CD ++C D + CP F + K KC PF+
Sbjct: 421 SSIQFTCDNKC--LESSRRCDGVWDCEDKSDEKGCDKCPSRS-FKCSADK--KC-LPFHT 474
Query: 213 DCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIE 332
C E +C + H D +C+ C++
Sbjct: 475 RCNGVAECSDGSDEHKCSCQECLGTHHDTYMCSESNRCLK 514
>AF016686-15|AAB66231.3| 572|Caenorhabditis elegans C-type lectin
protein 43 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 192 CDQPFNVDC--GDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIF 317
C+ PF+V G T P PN P GF+++ D + +F
Sbjct: 161 CEVPFHVTSTSGTPTRAPTPTPNGSVPCPEGFWSYKDNTCLKLF 204
>Z81519-5|CAI46603.1| 590|Caenorhabditis elegans Hypothetical
protein F29C12.1b protein.
Length = 590
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 210 VDCGDRTELQPPKPNSQCPRRNGF 281
+D G T L PP P +QCPR+ G+
Sbjct: 448 IDAGKGTPLAPP-PQAQCPRQPGW 470
>Z81519-4|CAB04218.1| 592|Caenorhabditis elegans Hypothetical
protein F29C12.1a protein.
Length = 592
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 210 VDCGDRTELQPPKPNSQCPRRNGF 281
+D G T L PP P +QCPR+ G+
Sbjct: 450 IDAGKGTPLAPP-PQAQCPRQPGW 472
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.1
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Frame = +3
Query: 192 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 368
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 369 HFDE--YSG-TCVWP----DSAGRQGCNEQQK--KTKDGFECPKEQLVDAQGQIVAHPKF 521
H D+ + G C + DS+ C+ T G++C + +G + +
Sbjct: 2118 HDDDPAHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYDCACKAPYRDEGPPQSPGRI 2177
Query: 522 PHPNDC--QRFYVCLNGVEPRDLG----CQVGEGYNEESQKCDAPENV 647
N+C C + RDL C G+ ++S P +
Sbjct: 2178 CRLNECLNPNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRI 2225
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEES 620
P NDC +C P C+ +GY +ES
Sbjct: 1988 PEQNDCHAAAICSEVNGPEKYTCKCRDGYTDES 2020
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.1
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Frame = +3
Query: 192 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 368
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 369 HFDE--YSG-TCVWP----DSAGRQGCNEQQK--KTKDGFECPKEQLVDAQGQIVAHPKF 521
H D+ + G C + DS+ C+ T G++C + +G + +
Sbjct: 2702 HDDDPAHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYDCACKAPYRDEGPPQSPGRI 2761
Query: 522 PHPNDC--QRFYVCLNGVEPRDLG----CQVGEGYNEESQKCDAPENV 647
N+C C + RDL C G+ ++S P +
Sbjct: 2762 CRLNECLNPNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRI 2809
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEES 620
P NDC +C P C+ +GY +ES
Sbjct: 2572 PEQNDCHAAAICSEVNGPEKYTCKCRDGYTDES 2604
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.1
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Frame = +3
Query: 192 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 368
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2061 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2117
Query: 369 HFDE--YSG-TCVWP----DSAGRQGCNEQQK--KTKDGFECPKEQLVDAQGQIVAHPKF 521
H D+ + G C + DS+ C+ T G++C + +G + +
Sbjct: 2118 HDDDPAHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYDCACKAPYRDEGPPQSPGRI 2177
Query: 522 PHPNDC--QRFYVCLNGVEPRDLG----CQVGEGYNEESQKCDAPENV 647
N+C C + RDL C G+ ++S P +
Sbjct: 2178 CRLNECLNPNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRI 2225
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEES 620
P NDC +C P C+ +GY +ES
Sbjct: 1988 PEQNDCHAAAICSEVNGPEKYTCKCRDGYTDES 2020
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.1
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Frame = +3
Query: 192 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 368
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 369 HFDE--YSG-TCVWP----DSAGRQGCNEQQK--KTKDGFECPKEQLVDAQGQIVAHPKF 521
H D+ + G C + DS+ C+ T G++C + +G + +
Sbjct: 2702 HDDDPAHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYDCACKAPYRDEGPPQSPGRI 2761
Query: 522 PHPNDC--QRFYVCLNGVEPRDLG----CQVGEGYNEESQKCDAPENV 647
N+C C + RDL C G+ ++S P +
Sbjct: 2762 CRLNECLNPNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRI 2809
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEES 620
P NDC +C P C+ +GY +ES
Sbjct: 2572 PEQNDCHAAAICSEVNGPEKYTCKCRDGYTDES 2604
>Z29443-10|CAA82578.2| 315|Caenorhabditis elegans Hypothetical
protein T07C4.2 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 52 SSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGR 183
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.1
Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 16/168 (9%)
Frame = +3
Query: 192 CDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGE-ATEVKCTAGL 368
C P N D++ P KP C A+P + C+ F +C + E +C G
Sbjct: 2645 CQCPINAK--DQSP-DPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGYRCRCRNGY 2701
Query: 369 HFDE--YSG-TCVWP----DSAGRQGCNEQQK--KTKDGFECPKEQLVDAQGQIVAHPKF 521
H D+ + G C + DS+ C+ T G++C + +G + +
Sbjct: 2702 HDDDPAHPGHRCSFMINECDSSNLNDCDRNANCIDTAGGYDCACKAPYRDEGPPQSPGRI 2761
Query: 522 PHPNDC--QRFYVCLNGVEPRDLG----CQVGEGYNEESQKCDAPENV 647
N+C C + RDL C G+ ++S P +
Sbjct: 2762 CRLNECLNPNRNTCDRNADCRDLDYGYTCTCRHGFYDQSPNPQEPGRI 2809
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 522 PHPNDCQRFYVCLNGVEPRDLGCQVGEGYNEES 620
P NDC +C P C+ +GY +ES
Sbjct: 2572 PEQNDCHAAAICSEVNGPEKYTCKCRDGYTDES 2604
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 37 LQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVL 159
+ AP++S P T+S+ T+ +TSSS+++ P ++ + L
Sbjct: 217 ISAPSTSQPSTTSSLITSPPSTSSSSMAPRKTPPNASSSSL 257
>AB121091-1|BAD14918.1| 315|Caenorhabditis elegans T-box
transcription factor TBX-8 protein.
Length = 315
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 52 SSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGR 183
S + K S D+ T S+ + SPQP +RTV S L R
Sbjct: 197 SQSDRKRNSPSADDSTTDESSSQVSSPQPKKSRTVSVSPPLMPR 240
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 225 RTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEV 350
+ ++ PKPN G+F H SV + F+ GE +V
Sbjct: 311 KRDMTSPKPNDDDGTLMGYFRHGYQSVADFFHRKTVGEEEQV 352
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 462 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEGYNEESQKCD 632
E +EQL ++VA H ++C++ + G + R + C+V GE N ++ C+
Sbjct: 461 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 520
Query: 633 APENVR 650
+ +VR
Sbjct: 521 SLASVR 526
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 462 ECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQV---GEGYNEESQKCD 632
E +EQL ++VA H ++C++ + G + R + C+V GE N ++ C+
Sbjct: 795 EKAREQLRKYGNELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICE 854
Query: 633 APENVR 650
+ +VR
Sbjct: 855 SLASVR 860
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = +1
Query: 421 KDVTNNKKKQRTASSAPKSSWLMPKDRXXXXXXXXXXXXANVSTYA*TVSSPVTSAAKSE 600
+ + + + RTAS PK+ P N S + + S +++ K
Sbjct: 59 RSASKSATRGRTASKTPKTPSKTPSSASARSRSRSRGRPTNASRLSASTPSASSTSVKRS 118
Query: 601 RVITKRARNAMRLKTFAD 654
R +TK R+ ++ AD
Sbjct: 119 RSVTKTPRDVVKTIEVAD 136
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/92 (25%), Positives = 39/92 (42%)
Frame = +1
Query: 52 SSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXXXXXXXXIGL 231
S+ P T +M +T + T S +S ES S + ST+ G +
Sbjct: 1918 STVPSSTGTMGSTSSGTVGSTIS-ESSTAASTSSQTGSTVTIGSTSGTNPSSPRS--LSQ 1974
Query: 232 NSSPPSPTHNVPAAMDSLPIPTPLCATSSTTA 327
+ PSP+ + + SLP +P +T S ++
Sbjct: 1975 ITITPSPSQSTESTQTSLPSSSPSPSTHSVSS 2006
>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
lineage protein 49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 370 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 486
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 40 QAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXXXXXXXXXX 219
Q+P S+ P +++S SSS SP S+ T S+ ++ +
Sbjct: 923 QSPTSAQPAQSSSTSAATVTVSSSQSPTSSPAQQSS-TPAGSSTVTVQQSSSFQSPQSTT 981
Query: 220 XIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSST 321
IG SS P+ P++ P T +C T
Sbjct: 982 QIG--SSTTVPSTQAPSSTSGGPTTTQICPNQQT 1013
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 385 PVPASGPIPPEDKDVTNNKKKQ 450
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 385 PVPASGPIPPEDKDVTNNKKKQ 450
PVP P+ P +TNNKKK+
Sbjct: 605 PVPPQVPVTPTKPVITNNKKKR 626
>U00065-1|AAK68287.1| 400|Caenorhabditis elegans Hypothetical
protein D1044.7 protein.
Length = 400
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 537 CQRFYVCLNGVEPRDLGCQVGEGYNEESQKC 629
CQR CL G + ++ CQ G+ +QKC
Sbjct: 147 CQRSEQCLGGSQCQNNLCQCPNGFANVNQKC 177
>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
protein LIN-49 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 370 TSTSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWL 486
+++ T AS P+ ++ N K S+PKSSWL
Sbjct: 718 STSGTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWL 756
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/133 (21%), Positives = 43/133 (32%)
Frame = +1
Query: 16 SRRQSLQLQAPNSSAPLKTASMKTTDNATSSSNVSMESPQPXSARTVLCSTLLSGRXXXX 195
++ Q AP S+ P A+ + TS +N +P + S S
Sbjct: 573 AQAQQASTPAP-STTPAPQAASSSQAAPTSGANTQPATPSASNQPPTPASASASTTLHVE 631
Query: 196 XXXXXXXXXIGLNSSPPSPTHNVPAAMDSLPIPTPLCATSSTTAXXXXXXXXXXXXAFTS 375
G S PS A DS IP+ A + T + T
Sbjct: 632 PASVAGGSQAG--SRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTP 689
Query: 376 TSTPVPASGPIPP 414
+ TP P++ PP
Sbjct: 690 SDTPAPSTSVPPP 702
>U41039-5|AAL11488.1| 357|Caenorhabditis elegans Synapse defective
protein 9, isoforma protein.
Length = 357
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 373 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
+T T P S P P + K++ S P+ L+PKD
Sbjct: 120 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 161
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 373 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
+T T P S P P + K++ S P+ L+PKD
Sbjct: 215 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 256
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +1
Query: 373 STSTPVPASGPIPPEDKDVTNNKKKQRTASSAPKSSWLMPKD 498
+T T P S P P + K++ S P+ L+PKD
Sbjct: 198 ATHTVTPRSRPTPKDIKEILETIAPSVGVSETPEEMCLLPKD 239
>U58746-6|AAB00626.2| 378|Caenorhabditis elegans Hypothetical
protein R05G6.9 protein.
Length = 378
Score = 27.5 bits (58), Expect = 9.4
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +3
Query: 291 PDPSVCNIFYNC--IEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFE 464
P S N+ N ++ +A E+ CTA +G CV A CN K GF+
Sbjct: 106 PTASSLNLLNNPFGLDDDALEM-CTAS--DCNGNGVCVGSKKAPLCLCN----LGKTGFK 158
Query: 465 CPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVG 599
C E A F P+DC +CL CQ+G
Sbjct: 159 CESEISGLLNMDPSAPITFCSPSDCNNKGLCLGTKNSFSCACQIG 203
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = +3
Query: 117 VDGVATTNXCPDGLVFDPTIRKINKCDQP---FNVDCGDRTELQPPKPNSQCPRR 272
+ G+ T PD +PT K + C P F+ T QPP+P PRR
Sbjct: 622 LSGIDTKRKVPD----EPTTSKRDACCSPVREFDDQQHQFTSSQPPQPAESSPRR 672
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.120 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,300,607
Number of Sequences: 27780
Number of extensions: 386548
Number of successful extensions: 1387
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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