Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5770
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 55 6e-10
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 54 2e-09
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 50 2e-08
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 41 1e-05
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 37 2e-04
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 35 0.001
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 35 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.55
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 2.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 2.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 3.9
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 3.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 3.9
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.0
AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 21 9.0
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 55.2 bits (127), Expect = 6e-10
Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKG---CVKIADFGLARWLGAPARSATPRVVTLWYRAPELLLQSPRQ 186
VHRDLK NLLL K VK+ADFGLA + A++ T Y +PE+L + P
Sbjct: 31 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLKKEPYG 90
Query: 187 TPALDMWAAGCILGELLANKP 249
P +D+WA G IL LL P
Sbjct: 91 KP-VDIWACGVILYILLVGYP 110
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 53.6 bits (123), Expect = 2e-09
Identities = 33/93 (35%), Positives = 47/93 (50%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLARWLGAPARSATPRVVTLWYRAPELLLQSPRQTPA 195
++RDLK NLLL +G VK+ DFG A+ L R T Y APE++L A
Sbjct: 488 IYRDLKPENLLLDSQGYVKLVDFGFAKRLD-HGRKTWTFCGTPEYVAPEVILNKGHDISA 546
Query: 196 LDMWAAGCILGELLANKPLLPGRTEIEQLELIV 294
D W+ G ++ ELL P G ++ +I+
Sbjct: 547 -DYWSLGVLMFELLTGTPPFTGGDPMKTYNIIL 578
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 50.4 bits (115), Expect = 2e-08
Identities = 28/77 (36%), Positives = 44/77 (57%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLARWLGAPARSATPRVVTLWYRAPELLLQSPRQTPA 195
VH D+K N+L++ G K+ DFG + +GAP T Y APE++ Q+ R TPA
Sbjct: 177 VHADVKPKNILMSKNGQPKLTDFGSSVLIGAP-NEIDKFYGTPGYTAPEVIKQN-RPTPA 234
Query: 196 LDMWAAGCILGELLANK 246
D+++ G + ++L K
Sbjct: 235 ADIYSLGIVAWQMLFRK 251
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 41.1 bits (92), Expect = 1e-05
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLARWLGAPARSA-TPR--VVTLWYRAPELLLQSPRQ 186
VHRDL N+L+ KIADFGL+R + + A T R + + + APE + +
Sbjct: 757 VHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPE-AIAFRKF 815
Query: 187 TPALDMWAAGCILGELLA 240
T A D+W+ G + E+++
Sbjct: 816 TSASDVWSMGIVCWEVMS 833
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 36.7 bits (81), Expect = 2e-04
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLAR 96
V+RDLK+ N+LL G +KIADFG+ +
Sbjct: 107 VYRDLKLDNVLLDQDGHIKIADFGMCK 133
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 34.7 bits (76), Expect = 0.001
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLARWLGAPARSATPRVVTLWYRAPELLLQSPRQTPA 195
VHRD+K+ N+LL + K+ DFG V T + APELL S +
Sbjct: 719 VHRDVKLKNVLLDIENRAKLTDFGFCI---TEVMMLGSIVGTPVHMAPELL--SGHYDSS 773
Query: 196 LDMWAAGCILGELLANKPLLP 258
+D++A G + L A LP
Sbjct: 774 VDVYAFGILFWYLCAGHVRLP 794
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 34.7 bits (76), Expect = 0.001
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +1
Query: 16 VHRDLKVSNLLLTDKGCVKIADFGLARWLGAPARSATPRVVTLWYRAPELLLQSPRQTPA 195
VHRD+K+ N+LL + K+ DFG V T + APELL S +
Sbjct: 757 VHRDVKLKNVLLDIENRAKLTDFGFCI---TEVMMLGSIVGTPVHMAPELL--SGHYDSS 811
Query: 196 LDMWAAGCILGELLANKPLLP 258
+D++A G + L A LP
Sbjct: 812 VDVYAFGILFWYLCAGHVRLP 832
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.55
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 134 TRGVALLAGAPNQRARPKSAILTQPLSVKRRLDTFKSLCTL 12
T GV L Q A+ ++++ P+S + +D F S+CT+
Sbjct: 278 TLGVTSLLTLSTQHAKSQASL--PPVSYLKAVDAFMSVCTV 316
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1
Query: 193 ALDMWAAGCIL 225
ALD+W AGC++
Sbjct: 261 ALDVWMAGCMM 271
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 2.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 331 EFSALPALQNFT--LKQQPYNNLKQRFPWLSAAGLRLLNFLFMYDPNKRATAEECLQSSY 504
EFS + + T L ++P N +++ + +R+ N + + R A +CLQSS
Sbjct: 5 EFSKISKVDRSTSPLPRKPVNPVQELKALFAEPPVRVSNG--GKEQDFRFEAIQCLQSSA 62
Query: 505 FKE 513
FKE
Sbjct: 63 FKE 65
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 394 KQRFPWLSAAG 426
KQR+PW+ AG
Sbjct: 237 KQRYPWVQLAG 247
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 394 KQRFPWLSAAG 426
KQR+PW+ AG
Sbjct: 152 KQRYPWVQLAG 162
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 394 KQRFPWLSAAG 426
KQR+PW+ AG
Sbjct: 471 KQRYPWVQLAG 481
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 133 VVTLWYRAPELLLQSPRQTPALDMW 207
VVT Y P++++ SP + + +W
Sbjct: 266 VVTSTYCEPQVVIVSPTRELTIQIW 290
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 9.0
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 478 AEECLQSSYFKE 513
A +CLQSS FKE
Sbjct: 1 AIQCLQSSAFKE 12
>AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein.
Length = 88
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 667 NSW*IVCLVVRSRVKIGQWYIPIDLT 590
N W VC+VVR K+ + +I +D++
Sbjct: 51 NKWSKVCIVVRR--KLEENWIHVDIS 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,166
Number of Sequences: 438
Number of extensions: 4791
Number of successful extensions: 24
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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