Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5763
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   263   1e-70
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   262   4e-70
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   258   3e-69
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   258   3e-69
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   258   3e-69
M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up prote...    30   2.2  
AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p pro...    30   2.2  
AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-P...    30   2.2  
AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-P...    30   2.2  
AY061599-1|AAL29147.1|  350|Drosophila melanogaster SD05291p pro...    30   2.9  
AE014298-2810|AAF48928.1|  350|Drosophila melanogaster CG7635-PA...    30   2.9  
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro...    29   5.1  
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P...    29   5.1  
AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA ...    28   9.0  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  263 bits (645), Expect = 1e-70
 Identities = 120/150 (80%), Positives = 134/150 (89%)
 Frame = +1

Query: 88  MGDIEDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 267
           M +++D HFET D  AS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 268 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLMADNGDLREDLKIPDG 447
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  I DD +LTLM D+GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEG 119

Query: 448 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 537
           +LG QLR DFDSGK+LLCTVLK+CGEECVI
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVI 149


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  262 bits (641), Expect = 4e-70
 Identities = 119/150 (79%), Positives = 134/150 (89%)
 Frame = +1

Query: 88  MGDIEDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 267
           M +++D HFET D  AS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 268 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLMADNGDLREDLKIPDG 447
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  I DD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 448 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 537
           +LG QLR DFDSGK+LLCTVLK+CGEECVI
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVI 149


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  258 bits (633), Expect = 3e-69
 Identities = 118/150 (78%), Positives = 133/150 (88%)
 Frame = +1

Query: 88  MGDIEDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 267
           M +++D  FET D  AS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 268 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLMADNGDLREDLKIPDG 447
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  I DD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 448 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 537
           +LG QLR DFDSGK+LLCTVLK+CGEECVI
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVI 149


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  258 bits (633), Expect = 3e-69
 Identities = 118/150 (78%), Positives = 133/150 (88%)
 Frame = +1

Query: 88  MGDIEDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 267
           M +++D  FET D  AS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 268 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLMADNGDLREDLKIPDG 447
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  I DD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 448 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 537
           +LG QLR DFDSGK+LLCTVLK+CGEECVI
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVI 149


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  258 bits (633), Expect = 3e-69
 Identities = 118/150 (78%), Positives = 133/150 (88%)
 Frame = +1

Query: 88  MGDIEDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 267
           M +++D  FET D  AS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 268 VGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLMADNGDLREDLKIPDG 447
           VGIDIF+ KKYEDICPSTHNMDVP+VKRED QL  I DD +LTLM ++GDLREDLK+P+G
Sbjct: 60  VGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEG 119

Query: 448 DLGTQLRTDFDSGKELLCTVLKSCGEECVI 537
           +LG QLR DFDSGK+LLCTVLK+CGEECVI
Sbjct: 120 ELGEQLRLDFDSGKDLLCTVLKACGEECVI 149


>M28863-1|AAA62770.1|  543|Drosophila melanogaster seven-up protein
           type 1 protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 227 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 340
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AY129452-1|AAM76194.1|  543|Drosophila melanogaster RE08410p
           protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 227 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 340
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1474|AAN13541.1|  746|Drosophila melanogaster CG11502-PA,
           isoform A protein.
          Length = 746

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 227 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 340
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AE014297-1473|AAF54773.1|  543|Drosophila melanogaster CG11502-PB,
           isoform B protein.
          Length = 543

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 227 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 340
           +P+P+S A L    +GL     +SM + VPPH+ W  P
Sbjct: 13  NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46


>AY061599-1|AAL29147.1|  350|Drosophila melanogaster SD05291p
           protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 218 STILHGRPFSITKPFLRRAEHCMGKVAEAKKSP 120
           STI+   P  +  P+L +  H MG   E K+SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331


>AE014298-2810|AAF48928.1|  350|Drosophila melanogaster CG7635-PA
           protein.
          Length = 350

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 218 STILHGRPFSITKPFLRRAEHCMGKVAEAKKSP 120
           STI+   P  +  P+L +  H MG   E K+SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331


>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
           protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 184 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 101
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
           isoform A protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 184 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 101
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA
            protein.
          Length = 2438

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
 Frame = -2

Query: 621  DCKKIKKFVNPINAE-LVYLSKTVFALTND-HALLTA-GFQHGAQQFLAAVKVSTQLCAE 451
            D K ++  +  I     + L +T+   T    ALLT  GF    +Q L A +V       
Sbjct: 1274 DTKTLENSIASIRENGFLILEETLPTYTKTGRALLTKFGFVAVQEQSLGATRVLVLARKA 1333

Query: 450  VTIRDFEVLTQVTVVSHQGQVAIIXDI-SQLVVFALHVGYVHVVCGGTDIF 301
            V   D +    V VV+ +     + D+ + L   A    YV+VVC G ++F
Sbjct: 1334 V---DLKTRKSVVVVATEQNFNWVDDLKAALATAATEEQYVYVVCQGEELF 1381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,147,369
Number of Sequences: 53049
Number of extensions: 667557
Number of successful extensions: 2170
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2170
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)