Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5763
         (628 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   189   2e-48
Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   180   8e-46
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    34   0.096
AF125951-2|AAD14691.1|  643|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF022968-4|AAB69886.2|  458|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF022968-3|AAV28363.1|  482|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical pr...    27   8.3  
U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical p...    27   8.3  

>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  189 bits (460), Expect = 2e-48
 Identities = 91/148 (61%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
 Frame = +1

Query: 100 EDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 279
           +D HF TGD  A+ATFP QCSALRKN  VM+KGRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 7   DDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAID 66

Query: 280 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLM-ADNGDLREDLKIPDGDLG 456
           IF  KK EDICPSTHNMDVP VKR +Y L  I DDGY +LM  ++ + ++DLK+PD +LG
Sbjct: 67  IFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELG 125

Query: 457 TQLRTDFDSGK-ELLCTVLKSCGEECVI 537
            Q+R  ++  +  +L  V+ + GEE ++
Sbjct: 126 QQIRDAYEKDEGSVLVQVVSAIGEEAIL 153


>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  180 bits (438), Expect = 8e-46
 Identities = 85/148 (57%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
 Frame = +1

Query: 100 EDTHFETGDFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 279
           ++  F++ +  A+ATFP QCSALRKN  VM++GRPCKIVEMSTSKTGKHGHAKVH+V ID
Sbjct: 41  DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAID 100

Query: 280 IFNGKKYEDICPSTHNMDVPHVKREDYQLTDIXDDGYLTLM-ADNGDLREDLKIPDGDLG 456
           IF  KK EDICPSTHNMDVP VKR +Y L  I +DG+ +LM  ++ +L++DLK+P+GDLG
Sbjct: 101 IFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLG 159

Query: 457 TQLRTDFDSGK-ELLCTVLKSCGEECVI 537
             +R   +  +  +L  V+ +CGEE ++
Sbjct: 160 NTIREALEKDEGSVLVQVVAACGEEAIL 187


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
 Frame = +1

Query: 325 NMDVPHVKREDYQLTDIX--DDGYLTLMADNGDLREDLKIPDGDLGTQLRTD-FDSGKEL 495
           N  +P +K++ Y L      + GY+  +   GDL+   KI D      LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 496 LCTVLKSCGEECVIVRQSKHSF*QINQLSIYRVNKLFNFFTINN 627
              ++K CG++C ++      +     L  Y  ++ F++FT  N
Sbjct: 630 HAALVKECGDKCELIDYLPLFWNNSTHLYQYFDSRGFSYFTSPN 673


>AF125951-2|AAD14691.1|  643|Caenorhabditis elegans Hypothetical
           protein D2063.2 protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = +1

Query: 334 VPHVKREDYQLTD--IXDDGYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLCTV 507
           +P++K++ Y L    + +  Y+  +A+  DLR    I +         ++ +G+     +
Sbjct: 524 LPNIKKKLYILDSMPLVNAPYIPKIAE--DLRNGKSIQEISKSLLPSDNYKNGRLRHAAL 581

Query: 508 LKSCGEECVIVRQSKHSF*QINQLSIYRVNKLFNFFT 618
           +K CG +C ++      F +I  +  Y  ++ F++FT
Sbjct: 582 VKECGRKCELIDYLPLFFNKITNMYQYVDSRGFSYFT 618


>Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical
           protein R11A8.8 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 385 GYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLC 501
           GYL      GD ++++K+ +G    Q+ +D D  K   C
Sbjct: 251 GYLPQQPKKGDKKKNIKLKEGRTEHQIVSDIDPAKLRAC 289


>AF022968-4|AAB69886.2|  458|Caenorhabditis elegans Hypothetical
           protein C10F3.4a protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 551 LL*RTITHSSPQDFSTVHNNSLP----LSKSVRNCVPRSPSGILRSSRRS 414
           L+ R++  S PQD  T+   + P    L  S ++ +PRSPS   RSS R+
Sbjct: 402 LIGRSVGTSRPQDLDTLAGLTSPEIDELRDSFQSFMPRSPSIRHRSSTRA 451


>AF022968-3|AAV28363.1|  482|Caenorhabditis elegans Hypothetical
           protein C10F3.4b protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = -3

Query: 551 LL*RTITHSSPQDFSTVHNNSLP----LSKSVRNCVPRSPSGILRSSRRS 414
           L+ R++  S PQD  T+   + P    L  S ++ +PRSPS   RSS R+
Sbjct: 426 LIGRSVGTSRPQDLDTLAGLTSPEIDELRDSFQSFMPRSPSIRHRSSTRA 475


>Z73908-1|CAA98130.2|  230|Caenorhabditis elegans Hypothetical
           protein F53B2.2 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 124 DFLASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTG 240
           DFL +  FP  C    KN  V ++G  C ++  +  + G
Sbjct: 154 DFLPAGNFPTSCECGTKNAMVRMEG--CALITWAVFEDG 190


>U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical
           protein C50F2.8 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = -2

Query: 447 TIRDFEVLTQVTVVSHQGQVAIIXDISQLVVFALHVGYVHVVCGGTDIFILFTIEDINPN 268
           T  D   LTQV V  H GQ+ ++  I++   + L  G V     G D++    IE++   
Sbjct: 137 TTVDAGQLTQVEVEKHGGQL-VVTKINEKSNYDLKPGDVITQVDGKDVYFRADIENLK-G 194

Query: 267 QVNFSVAVLSGFGCGHFN 214
           +V  +V   +G  C   N
Sbjct: 195 KVELTVEP-AGIHCAPAN 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,898,429
Number of Sequences: 27780
Number of extensions: 336501
Number of successful extensions: 924
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)