Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5759
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0180 + 1268129-1268237,1268382-1268731,1268903-1269808,127...    30   1.8  
02_01_0221 + 1447305-1447435,1448693-1449140                           28   7.2  
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121...    27   9.6  
10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505           27   9.6  
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149           27   9.6  
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515           27   9.6  
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445...    27   9.6  

>05_01_0180 +
           1268129-1268237,1268382-1268731,1268903-1269808,
           1270120-1271361
          Length = 868

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH NFKA+   L+K++ D+
Sbjct: 591 VRSLKTVHSNFKAVLTTLLKLAQDI 615


>02_01_0221 + 1447305-1447435,1448693-1449140
          Length = 192

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 580 LRSRNFP*LH-LFHSLGYPAGPRLARVSESSFPTPTCVRADFLR 452
           +R ++FP L  +       A  +  R+S SSFP+ T  R DF++
Sbjct: 137 IRPKSFPVLPTMMQPTRISASSQCRRISYSSFPSATAKRNDFMQ 180


>12_02_0507 +
           19810446-19811048,19811220-19811466,19811590-19812125,
           19812397-19813620
          Length = 869

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH  FKA+   L+K++ D+
Sbjct: 598 VRSLKTVHSKFKAVLTALLKLAQDI 622


>10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505
          Length = 916

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH  FKA+   L+K++ D+
Sbjct: 639 VRSLKTVHSKFKAVLTALLKLAQDI 663


>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
          Length = 916

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH  FKA+   L+K++ D+
Sbjct: 639 VRSLKTVHSKFKAVLTALLKLAQDI 663


>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
          Length = 916

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH  FKA+   L+K++ D+
Sbjct: 639 VRSLKTVHSKFKAVLTALLKLAQDI 663


>04_03_0101 -
           11242252-11243295,11243607-11244131,11244208-11244513,
           11244692-11245231
          Length = 804

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 151 VNAIKNVHRNFKAI*VVLIKISDDM 77
           V ++K VH  FKA+   L+K++ D+
Sbjct: 593 VRSLKTVHSKFKAVLTALLKLAQDI 617


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,716,562
Number of Sequences: 37544
Number of extensions: 274710
Number of successful extensions: 491
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)