Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5755
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 27 0.24
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 25 0.73
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 25 0.73
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.2
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 2.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 2.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.9
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 5.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 6.8
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.0
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 26.6 bits (56), Expect = 0.24
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 595 LQVWQNALPEPLLLQERPNWT 657
L W +P+P +L+ +P WT
Sbjct: 28 LPSWDGKMPQPCILKPKPLWT 48
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.73
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 202 VVVVDGCPQVGPE---RLEKLQSVINKIFSK-FGKIVNEY 309
+V+ CPQ PE +++K+ S I + + K + KIV +Y
Sbjct: 74 LVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 25.0 bits (52), Expect = 0.73
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +1
Query: 202 VVVVDGCPQVGPE---RLEKLQSVINKIFSK-FGKIVNEY 309
+V+ CPQ PE +++K+ S I + + K + KIV +Y
Sbjct: 74 LVLRGACPQCSPEETRQIKKVLSHIQRTYPKEWSKIVQQY 113
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.2
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 430 FLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMD 546
F V L T Y EW+PPA + D++++ D
Sbjct: 125 FEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFD 163
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 226 QVGPERLEKLQSVINKIFSKFGKIVNE 306
Q+ P+R++ Q N++++ KIV+E
Sbjct: 324 QITPKRIQYAQHKENELYANLMKIVHE 350
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 226 QVGPERLEKLQSVINKIFSKFGKIVNE 306
Q+ P+R++ Q N++++ KIV+E
Sbjct: 362 QITPKRIQYAQHKENELYANLMKIVHE 388
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 625 PLLLQERPNWTETYAVWSPFRNILS 699
P L + NW Y W P N+++
Sbjct: 259 PTYLIKWKNWDLKYNTWEPISNLIN 283
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 2.9
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 514 VQSDLQWYLMDPDAYDQFLVGIGTGVA--LQVWQNALPEPLLLQERPNWTETYAVWSPFR 687
V+S +Y+ LVG GTG+A W + L E ++ RP+ E VW F
Sbjct: 952 VRSAPNFYMPSEPKAPMILVGPGTGIAPFRGFWHHRLAE---IKRRPD-LEYGKVWLFFG 1007
Query: 688 NILSNFSLAR 717
N L R
Sbjct: 1008 CRQRNLDLYR 1017
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 5.1
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 120 LWVVKI-RFFFKVLFLIVTLRSWIRF 46
+++ K+ RFFF FLI+ + W F
Sbjct: 357 IYIDKVSRFFFPFSFLILNVVYWSTF 382
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 6.8
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +1
Query: 481 EWEPPAPQPFKVQSDLQWYLMD 546
EW+PPA + D++++ D
Sbjct: 138 EWKPPAIYKSSCEIDVEYFPFD 159
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 325 NGLTTGYIFLEYSNPQNAAEAVKA 396
N L Y F +YSN A E++ A
Sbjct: 23 NVLDFDYYFYDYSNRTQALESIIA 46
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,678
Number of Sequences: 438
Number of extensions: 4653
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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