Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5754
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86547-1|BAA13109.1| 2064|Drosophila melanogaster still life typ...    32   0.94 
D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life typ...    32   0.94 
AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p pro...    32   0.94 
AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,...    32   0.94 
AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,...    32   0.94 
AE014296-985|AAF50755.3| 2072|Drosophila melanogaster CG5406-PB,...    32   0.94 

>D86547-1|BAA13109.1| 2064|Drosophila melanogaster still life type 1
            protein.
          Length = 2064

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 987  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1046

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1047 LLTHVSRPTKN 1057


>D86546-1|BAA13108.1| 2044|Drosophila melanogaster still life type 2
            protein.
          Length = 2044

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 967  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1026

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1027 LLTHVSRPTKN 1037


>AY118305-1|AAM48334.1| 2061|Drosophila melanogaster GH10341p protein.
          Length = 2061

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 967  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1026

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1027 LLTHVSRPTKN 1037


>AE014296-987|AAF50756.3| 2052|Drosophila melanogaster CG5406-PA,
            isoform A protein.
          Length = 2052

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 967  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1026

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1027 LLTHVSRPTKN 1037


>AE014296-986|AAS65075.1| 2061|Drosophila melanogaster CG5406-PC,
            isoform C protein.
          Length = 2061

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 967  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1026

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1027 LLTHVSRPTKN 1037


>AE014296-985|AAF50755.3| 2072|Drosophila melanogaster CG5406-PB,
            isoform B protein.
          Length = 2072

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = +1

Query: 13   KLKHVADAWNQNVT*KLNRHPLYYKTDK*P-NL-RFTGKSIDQRCKMVNESNGAIPAPQE 186
            KLKH+A+     VT +  RH +  +  +   NL R   +    RC M +  +G +P P+ 
Sbjct: 987  KLKHMAELQQSVVTDQETRHQIQTQILQWEENLERLHCEQFRLRCYMASLQSGELPNPKS 1046

Query: 187  LETFISPDEKN 219
            L T +S   KN
Sbjct: 1047 LLTHVSRPTKN 1057


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,909,740
Number of Sequences: 53049
Number of extensions: 563121
Number of successful extensions: 909
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)