Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5746
(632 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 33 0.034
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 29 0.42
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 29 0.42
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 28 0.97
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 27 2.3
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 27 2.3
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 27 3.0
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 3.0
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.0
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 27 3.0
SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces po... 27 3.0
SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|... 26 3.9
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 5.2
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 26 5.2
SPBC902.05c |idh2|glu2|isocitrate dehydrogenase |Schizosaccharom... 25 6.9
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 25 6.9
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 25 6.9
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 33.1 bits (72), Expect = 0.034
Identities = 38/146 (26%), Positives = 62/146 (42%)
Frame = +1
Query: 127 RPIAITSLLSKVMERIINTQPLKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALE 306
RP+ I S K+++ I+ E L + +GFR GRS L + +
Sbjct: 308 RPLTIGSPRDKLVQEILRIVLEAIYEP--LFNTASHGFRPGRSCHSALRSIFTNF----- 360
Query: 307 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 486
KG + DI FD + H L++ L S + + I L+ +T +
Sbjct: 361 -KGCTWWIEGDIKACFDSIPHDKLIALLSSKIKDQRFIQLIRKALNAGYLT-----ENRY 414
Query: 487 TMTINAGVPQGSVLSPTLFILYINDM 564
I G PQGS++SP L +Y++ +
Sbjct: 415 KYDI-VGTPQGSIVSPILANIYLHQL 439
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 355 DRVWHRALLSKLPSYGIPEGLCKWIASFLDG 447
D V A S+LP YGI GL W A++ G
Sbjct: 72 DYVLAHAHSSELPRYGIKWGLANWTAAYATG 102
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 355 DRVWHRALLSKLPSYGIPEGLCKWIASFLDG 447
D V A S+LP YGI GL W A++ G
Sbjct: 72 DYVLAHAHSSELPRYGIKWGLANWTAAYATG 102
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 28.3 bits (60), Expect = 0.97
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 554 IYRMKSVGESTEPCGTPALMV 492
+YR KSV ES EP G P L +
Sbjct: 140 LYREKSVEESDEPSGIPILFI 160
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -1
Query: 473 PSTTTVMLRPSKKLA--IHLQSPSGIP*DGSFDRSALCQTLSKAFAISRLTARASPLLSK 300
PS+T + PS A +H Q P D S D +A+ + +RL+ PLLS
Sbjct: 207 PSSTVSSIAPSTLEAGNLHSQQPPKFSVDSSVDDNAITPRKPFSKIPNRLSPSTQPLLSN 266
Query: 299 A 297
+
Sbjct: 267 S 267
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 481 SDTMTINAGVPQGSVLSPTLFILYINDMLSIDGMHCY 591
S +T+ + VP+ S FI Y + +LSI + C+
Sbjct: 39 SSRLTVRSAVPEKSAFGSIEFIFYFSVILSILTIACF 75
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 424 WIASFLDGRSITVVVDGDCSDTMTIN-AGVPQGS 522
W SFL G+ +TVV + S+ IN +P GS
Sbjct: 519 WSESFLAGKRLTVVKNQAVSNDDNINMVNIPDGS 552
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 208 RQLISDRQYGF--RHGRSAGDLLVYLTHRWAEALESKGEALAVSLDI 342
RQ R+ GF RH R G + + + + +A + G A AVS DI
Sbjct: 355 RQSRMSRRLGFTLRHMRINGSSVSFYPNPYTDATDIAGNATAVSEDI 401
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 505 GVPQGSVLSPTLFILYINDML 567
G+PQGS+LS L Y+ D++
Sbjct: 703 GIPQGSILSSFLCHFYMEDLI 723
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 1 LTPALTRLYRLSYCANRVPSSWKTA-HVHPIPKKGDRSDPSSYRPIAIT 144
L +LTR+ L + + + K +V PKKG DPS+ P +T
Sbjct: 14 LRVSLTRVAHLVFANSHESNDLKMVENVSSTPKKGVLEDPSTLTPEVVT 62
>SPBC2G2.13c |||deoxycytidylate deaminase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 211 QLISDRQYGFRHGR----SAGDLLVYLTHRWAEALESKG 315
QL D +Y +R G S DL+ YLT RW E G
Sbjct: 35 QLNEDGEYIYRTGDLVLGSVDDLISYLTPRWRERFVING 73
>SPBC800.14c |||DUF1772 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 160
Score = 26.2 bits (55), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 563 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 477
MSL+Y +SVG T PCG+ + ++ Q
Sbjct: 1 MSLVYLFQSVGILT-PCGSAGAIAYITSQ 28
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 527 STEPCGTPALMVMVSEQSPSTTTVMLRPSKKLAIHLQSP 411
S++P GTP + SPSTT V + I+ ++P
Sbjct: 200 SSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRAP 238
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 514 QGSVLSPTLFILYINDMLSIDGMHCY 591
+ S L+ +L LY+ D + ID H Y
Sbjct: 502 KSSTLTESLAFLYLEDNMPIDAFHLY 527
>SPBC902.05c |idh2|glu2|isocitrate dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 7 PALTRLYRLSYCANRVPSSWKTAHVHPIPKKGDRSDP 117
P + + + A +VP W+ V+PI K G + P
Sbjct: 58 PEIAQSVERIFKAAKVPIEWERVKVYPILKNGTTTIP 94
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.4 bits (53), Expect = 6.9
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = -1
Query: 485 SEQSPSTTTVMLRPSKKLAIHLQSPSGIP*DGSFDRSALCQTLSKAFAISRLTARASPLL 306
+ Q S + V L S++ + H + +G+F +L L+ ISRL+A A+P L
Sbjct: 351 TSQISSLSLVDLAGSERASAHHERRK----EGAFINKSL---LTLGTVISRLSAAANPSL 403
Query: 305 SKASAHL*VRYTR 267
+ S H+ R ++
Sbjct: 404 TSNSGHIPYRESK 416
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 277 LTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKL 390
+ ++W E ES AL SLD + W + LS+L
Sbjct: 606 IVNKWKEGKESNLRALLASLDTILWPECRWQKVSLSEL 643
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,740,287
Number of Sequences: 5004
Number of extensions: 58702
Number of successful extensions: 151
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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