Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5746
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 101 4e-22
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 74 7e-14
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 65 5e-11
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 64 1e-10
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 64 1e-10
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 58 4e-09
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 31 0.69
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 31 0.69
AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical... 29 2.8
AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical... 29 2.8
AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical ... 29 3.7
AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical ... 28 4.8
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 8.4
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 8.4
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 101 bits (242), Expect = 4e-22
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 7/209 (3%)
Frame = +1
Query: 13 LTRLYRLSYCANRVPSSWKTAHVHPIPK-KGDRSDPSSYRPIAITSLLSKVMERIINTQP 189
L LY +S N +P WK A+V IPK K D + SSYRPI++ S ++K++E+ I
Sbjct: 367 LAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAI---- 422
Query: 190 LKYLEDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKG---EALAVSLDIAKAFDR 360
LK +++ Q+GF+ S ++ +T+ L K A+ LD+ AFD+
Sbjct: 423 LKRIKNSIESPAHQHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDK 482
Query: 361 VWHRALLSKL-PSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPT 537
V + L + L + GI + W+ ++L R I D S T+ GVPQGSV+SP
Sbjct: 483 VPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPN 542
Query: 538 LFILYINDMLSIDG--MHCYADDSTGDAR 618
LF Y+ DM + + YADD + AR
Sbjct: 543 LFTFYLKDMPTQQDTMLISYADDMSIIAR 571
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 74.1 bits (174), Expect = 7e-14
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Frame = +1
Query: 289 WAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVV 468
W ++++ + + LD +KAFDR+ H LL KL S + L W+ FL RS V +
Sbjct: 4 WTKSIDHGEQIDIIYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRI 63
Query: 469 DGDCSDTMTINAGVPQGSVLSPTLFILYINDMLSI--DGMHC--YADDS 603
S GVPQG+VLSP LF +Y+ND+ SI + + C +ADD+
Sbjct: 64 GQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDT 112
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +1
Query: 346 KAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTM-TINAGVPQGS 522
KAFD+V H LL KL +GI C W FL R+ +V V+ + I++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 523 VLSPTLFILYINDML 567
V P LF+++IN +L
Sbjct: 62 VSGPFLFLIFINSLL 76
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 63.7 bits (148), Expect = 1e-10
Identities = 49/167 (29%), Positives = 72/167 (43%)
Frame = +1
Query: 43 ANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINTQPLKYLEDRQLIS 222
+ VP WKT+ I KKGDR + +YRPI + +L KV + + + + L++ Q +
Sbjct: 425 SRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV- 483
Query: 223 DRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYG 402
Q GFR S D + L E + V +D KAFD V H+A+ L G
Sbjct: 484 -EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQG 542
Query: 403 IPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLF 543
+G + T + + GV QG +SP LF
Sbjct: 543 -ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVRQGDPISPNLF 588
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 63.7 bits (148), Expect = 1e-10
Identities = 49/167 (29%), Positives = 72/167 (43%)
Frame = +1
Query: 43 ANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINTQPLKYLEDRQLIS 222
+ VP WKT+ I KKGDR + +YRPI + +L KV + + + + L++ Q +
Sbjct: 596 SRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV- 654
Query: 223 DRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYG 402
Q GFR S D + L E + V +D KAFD V H+A+ L G
Sbjct: 655 -EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQG 713
Query: 403 IPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLF 543
+G + T + + GV QG +SP LF
Sbjct: 714 -ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVRQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 63.7 bits (148), Expect = 1e-10
Identities = 49/167 (29%), Positives = 72/167 (43%)
Frame = +1
Query: 43 ANRVPSSWKTAHVHPIPKKGDRSDPSSYRPIAITSLLSKVMERIINTQPLKYLEDRQLIS 222
+ VP WKT+ I KKGDR + +YRPI + +L KV + + + + L++ Q +
Sbjct: 335 SRNVPKPWKTSKTTLIFKKGDRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPV- 393
Query: 223 DRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYG 402
Q GFR S D + L E + V +D KAFD V H+A+ L G
Sbjct: 394 -EQAGFRRSFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQG 452
Query: 403 IPEGLCKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLF 543
+G + T + + GV QG +SP LF
Sbjct: 453 -ADGAYIDLLKECYKNCTTNFTPFHRPVAVPVTKGVRQGDPISPNLF 498
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Frame = +1
Query: 385 KLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS-DTMTINAGVPQGSVLSPTLFILYIND 561
KL +G+ C W FL+ R+ +V ++ S ++ I++GVPQGSV P LFIL+IN+
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINN 898
Query: 562 MLSID-----GMHCYADD 600
+L ID + C+ADD
Sbjct: 899 LL-IDLAPTINISCFADD 915
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 13 LTRLYRLSYCANRVPSSWKTAHVHPIPKKG 102
L+ +Y+ S+ +++P WK A + PIPKKG
Sbjct: 809 LSIIYKQSFADSKIPDCWKKAIIIPIPKKG 838
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +1
Query: 280 TH-RWAEALESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSI 456
TH ++ E +E+ + ++ AFD+V H L+SKL + + L W + ++
Sbjct: 873 THCKYEEYVEAHKRVDLIHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTF 932
Query: 457 TVVVDGDC-SDTMTINAGVPQGSVLSPTLFILYINDML 567
+V V+ S+ G P+GS +F+++IN +L
Sbjct: 933 SVQVNDHLESEKHNCQIGAPRGSESRQFMFLVFINSLL 970
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 563 MSLIYRMKSVGESTEPCGTPALMVMVSEQ 477
+SL KS GE T+PCGTP + SE+
Sbjct: 50 ISLTNMPKSTGERTDPCGTPHTAFLGSEK 78
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 31.1 bits (67), Expect = 0.69
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 286 RWAEALESKGEALAVSL---DIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSI 456
R + L+S G +++L D KAFD V H+A+ L G E +
Sbjct: 23 RSKDFLKSAGNTRSLTLVFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYK-NCT 81
Query: 457 TVVVDGDCSDTMTINAGVPQGSVLSPTLF 543
T T+ + GV QG +SP LF
Sbjct: 82 TNFTPFLRPITVPVTKGVRQGDPISPNLF 110
>AL117203-21|CAN86632.1| 171|Caenorhabditis elegans Hypothetical
protein Y48C3A.18b protein.
Length = 171
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 482 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMACIAMQMIAR 607
L+P P+TL F ++ C P F+ + C + C + I +
Sbjct: 17 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 58
>AL117203-20|CAB55118.1| 244|Caenorhabditis elegans Hypothetical
protein Y48C3A.18a protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 482 LIP*PLTLAFHKVRCSPPRFSSCISMTCCLLMACIAMQMIAR 607
L+P P+TL F ++ C P F+ + C + C + I +
Sbjct: 90 LLPGPVTLMFERLPCLPAEFNPGVVNVACRVPDCPIVSTICK 131
>AF016443-7|AAK68184.1| 285|Caenorhabditis elegans Hypothetical
protein C17E7.9a protein.
Length = 285
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 342 REGLRQGLA*GTSIEATILRNPR 410
RE + +GLA GT + T+ R PR
Sbjct: 246 RENVHEGLADGTQVTTTVFRGPR 268
>AF016443-6|AAK68185.1| 257|Caenorhabditis elegans Hypothetical
protein C17E7.9b protein.
Length = 257
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 342 REGLRQGLA*GTSIEATILRNPR 410
RE + +GLA GT + T+ R PR
Sbjct: 218 RENVHEGLADGTQVTTTVFRGPR 240
>AC024771-2|AAK70659.1| 697|Caenorhabditis elegans Hypothetical
protein Y40B10A.4 protein.
Length = 697
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = -2
Query: 379 EVPYARPCRRPSRYQGSQQE----PRPCSPRLQP 290
E P R R+PSR+ S + P PCSP P
Sbjct: 340 ENPPVRDSRKPSRFSASHADKKHYPAPCSPDANP 373
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 58 SSWKTAHVHPIPKKGDRSDPSSYRPIAIT--SLLSKVMERIINTQPLKYLEDRQLISDRQ 231
+S + HP+ KK S+P + I ++ ERII T+P++ E LI ++
Sbjct: 705 ASQSASESHPLMKKMLTSEPKEENGVLINGHAVQESGAERIIKTEPIRTDEPSVLIESQE 764
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 472 RLQRP*CSAHPKS*RSTCRVPRGFRKMVASIEVPYARPCRRPSRYQGSQQEPRPCSPR 299
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 472 RLQRP*CSAHPKS*RSTCRVPRGFRKMVASIEVPYARPCRRPSRYQGSQQEPRPCSPR 299
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 472 RLQRP*CSAHPKS*RSTCRVPRGFRKMVASIEVPYARPCRRPSRYQGSQQEPRPCSPR 299
R +RP + P R+ C P G + P PC+RP Q Q +P+P R
Sbjct: 84 RNRRPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRP---QPPQPQPQPYPQR 138
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 202 EDRQLISDRQYGFRHGRSAGDLLVYLTHRWAEALESKGEALAVSLDIAKAFD 357
ED+Q S R Y HG + G + Y WAE KGE + ++ I + D
Sbjct: 1823 EDQQRTS-RNYFDTHGLAEG--VTYFFSVWAETSAGKGEQRSANVTIGPSKD 1871
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,282
Number of Sequences: 27780
Number of extensions: 349240
Number of successful extensions: 979
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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