Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5746
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   5.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   9.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   9.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   9.9  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 597 ICIAMHAINRQHVIDIQDEK 538
           IC+A   IN+Q + D+ D K
Sbjct: 32  ICMAKTGINKQIINDVNDGK 51


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 611 SPVLSSA*QCMPSIDSMSLI 552
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 165 HHLGKQGSYRDRPIAR 118
           HH G  GS +D P  R
Sbjct: 64  HHYGAAGSQQDMPYPR 79


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 151 LSKVMERIINTQPLKYLEDRQLISDRQYGFRHGRSAG 261
           L+++++R +   P     D   + +R+Y   HG  +G
Sbjct: 675 LTRLIKRELVDAPADQEGDDDQVDEREYPESHGHDSG 711


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 480 AVTVYNDRDAPPIQKASDPLAESLGDSVRW 391
           AV  Y D+D  PI   +D   ++     RW
Sbjct: 427 AVQKYQDQDYQPIYFVADSFEDAKEKFRRW 456


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 138 DNFLAFQGDGANNKYTTP 191
           DN LA   +  NN Y+TP
Sbjct: 395 DNALASHNNLLNNVYSTP 412


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 594 CIAMHAINRQHVIDIQDEKRGGEHR 520
           C  MH + RQ V+      R  +HR
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHR 233


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 594 CIAMHAINRQHVIDIQDEKRGGEHR 520
           C  MH + RQ V+      R  +HR
Sbjct: 209 CRTMHRLTRQVVVSSVANVRIADHR 233


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,990
Number of Sequences: 438
Number of extensions: 4063
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)