Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5744
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051830-1|AAK93254.1|  960|Drosophila melanogaster LD33689p pro...    31   1.2  
AE013599-2168|AAF58070.2|  960|Drosophila melanogaster CG8405-PA...    31   1.2  
BT022456-1|AAY54872.1|  484|Drosophila melanogaster IP11733p pro...    30   3.6  
AE014298-685|AAF45989.2|  450|Drosophila melanogaster CG12681-PA...    30   3.6  

>AY051830-1|AAK93254.1|  960|Drosophila melanogaster LD33689p
           protein.
          Length = 960

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 260 FPNTQVYYYIFLLNLLEKRSHEQAIK*LIRQ-DSILFIVEVKLLVGR*RLDST 105
           + N  +YYY   +N+L+   H  AI+    + D   +IVE  L  G  RL S+
Sbjct: 186 YSNESLYYYFDAINILDTYDHPNAIQLKNEEDDEEQYIVEYSLEYGHLRLSSS 238


>AE013599-2168|AAF58070.2|  960|Drosophila melanogaster CG8405-PA
           protein.
          Length = 960

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 260 FPNTQVYYYIFLLNLLEKRSHEQAIK*LIRQ-DSILFIVEVKLLVGR*RLDST 105
           + N  +YYY   +N+L+   H  AI+    + D   +IVE  L  G  RL S+
Sbjct: 186 YSNESLYYYFDAINILDTYDHPNAIQLKNEEDDEEQYIVEYSLEYGHLRLSSS 238


>BT022456-1|AAY54872.1|  484|Drosophila melanogaster IP11733p
           protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 530 PLPKTKTDDSTNDTFDDGTEKNRS*FKKKTILKRFISIIYVP*C*KKTSNETQNQKQ 360
           P+  TKT   +NDT DD      S  K K  L +++  + +P   K+T  + QN+ Q
Sbjct: 351 PVAATKTAKESNDTSDDQEYSFDS--KVKIELLKYLHSVRIPKA-KRTQKQVQNEDQ 404


>AE014298-685|AAF45989.2|  450|Drosophila melanogaster CG12681-PA
           protein.
          Length = 450

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 530 PLPKTKTDDSTNDTFDDGTEKNRS*FKKKTILKRFISIIYVP*C*KKTSNETQNQKQ 360
           P+  TKT   +NDT DD      S  K K  L +++  + +P   K+T  + QN+ Q
Sbjct: 317 PVAATKTAKESNDTSDDQEYSFDS--KVKIELLKYLHSVRIPKA-KRTQKQVQNEDQ 370


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,128,718
Number of Sequences: 53049
Number of extensions: 577703
Number of successful extensions: 1388
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)