Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5743
(571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK027383-1|BAB55074.1| 143|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC024290-1|AAH24290.1| 329|Homo sapiens deoxynucleotidyltransfe... 30 5.0
BC009535-1|AAH09535.1| 212|Homo sapiens DNTTIP1 protein protein. 30 5.0
AL050348-11|CAI21036.1| 231|Homo sapiens deoxynucleotidyltransf... 30 5.0
AL050348-10|CAI21035.1| 145|Homo sapiens deoxynucleotidyltransf... 30 5.0
AL050348-9|CAI21034.1| 279|Homo sapiens deoxynucleotidyltransfe... 30 5.0
AL050348-7|CAC17441.1| 329|Homo sapiens deoxynucleotidyltransfe... 30 5.0
AB035676-1|BAB62888.1| 329|Homo sapiens TdT binding protein pro... 30 5.0
AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein. 30 6.6
M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth f... 29 8.7
J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth f... 29 8.7
BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth... 29 8.7
AK125184-1|BAC86075.1| 376|Homo sapiens protein ( Homo sapiens ... 29 8.7
AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth... 29 8.7
>AK027383-1|BAB55074.1| 143|Homo sapiens protein ( Homo sapiens
cDNA FLJ14477 fis, clone MAMMA1001522. ).
Length = 143
Score = 30.7 bits (66), Expect = 3.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 501 RTGTPDGGQRPLQRLTHRFPGH--AVRYH*HEQQTFHYTNTVPGRAPGRRTG 352
R G P GG RP + H GH + + HE+ H+ PG APG G
Sbjct: 62 RNGVPIGGMRPWDEVLH-LAGHDSILIFDCHEEVLEHH--DAPGEAPGWAAG 110
>BC024290-1|AAH24290.1| 329|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 132 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 183
>BC009535-1|AAH09535.1| 212|Homo sapiens DNTTIP1 protein protein.
Length = 212
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 15 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 66
>AL050348-11|CAI21036.1| 231|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 231
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 58 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 109
>AL050348-10|CAI21035.1| 145|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 145
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 92 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 143
>AL050348-9|CAI21034.1| 279|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 279
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 82 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 133
>AL050348-7|CAC17441.1| 329|Homo sapiens
deoxynucleotidyltransferase, terminal, interacting
protein 1 protein.
Length = 329
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 132 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 183
>AB035676-1|BAB62888.1| 329|Homo sapiens TdT binding protein
protein.
Length = 329
Score = 30.3 bits (65), Expect = 5.0
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -2
Query: 480 GQRPLQRLTHRFPGHAVRYH*HEQQTFHYTNTVPGRAPGRRTGHDGVSFDHDAA 319
G++ + RLTH PG R E++ H + +P + GR GH +S D AA
Sbjct: 132 GEKVIPRLTHELPG-IKRGRQAEEECAHRGSPLPKKRKGRPPGHI-LSSDRAAA 183
>AB002294-1|BAA20756.2| 1838|Homo sapiens KIAA0296 protein.
Length = 1838
Score = 29.9 bits (64), Expect = 6.6
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = +3
Query: 285 HLDLKMRCITM*QRRGQTRPR---HGRSYAPARGPAQC-WCSEMSVVRVSDNALRGRETD 452
H D K C ++ + +T R HGR +AP GP C C R+S + + +
Sbjct: 1735 HTDPKRHCCSICGKAFRTAARLEGHGRVHAPREGPFTCPHCPRHFRRRISFVQHQQQHQE 1794
Query: 453 E*DAAEGAVRRQGSQSWCQEVAEHTRG 533
E A +GSQ +EV RG
Sbjct: 1795 EWTVAGSGRGHEGSQ---EEVGTQWRG 1818
>M21616-1|AAA36427.1| 1106|Homo sapiens platelet-derived growth
factor receptor protein.
Length = 1106
Score = 29.5 bits (63), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 569 FPQHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGF 444
F QH S++ PPS+ ++SN L GL PL + +L S G+
Sbjct: 700 FLQHHSDKRRPPSAELYSNALPVGL-PLPSHVSLTGESDGGY 740
>J03278-1|AAA60049.1| 1106|Homo sapiens platelet-derived growth
factor receptor protein.
Length = 1106
Score = 29.5 bits (63), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 569 FPQHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGF 444
F QH S++ PPS+ ++SN L GL PL + +L S G+
Sbjct: 700 FLQHHSDKRRPPSAELYSNALPVGL-PLPSHVSLTGESDGGY 740
>BC032224-1|AAH32224.1| 1106|Homo sapiens platelet-derived growth
factor receptor, beta polypeptide protein.
Length = 1106
Score = 29.5 bits (63), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 569 FPQHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGF 444
F QH S++ PPS+ ++SN L GL PL + +L S G+
Sbjct: 700 FLQHHSDKRRPPSAELYSNALPVGL-PLPSHVSLTGESDGGY 740
>AK125184-1|BAC86075.1| 376|Homo sapiens protein ( Homo sapiens
cDNA FLJ43194 fis, clone FEBRA2000253. ).
Length = 376
Score = 29.5 bits (63), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 557 SSNEYSPPSSGMFSNFLAPGLGPLT 483
SS PP +G+ N L+PG+ PLT
Sbjct: 39 SSKHLMPPRTGLLQNNLSPGMIPLT 63
>AB209657-1|BAD92894.1| 777|Homo sapiens platelet-derived growth
factor receptor beta precursor variant protein.
Length = 777
Score = 29.5 bits (63), Expect = 8.7
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 569 FPQHSSNEYSPPSSGMFSNFLAPGLGPLTADSALCSVSLIGF 444
F QH S++ PPS+ ++SN L GL PL + +L S G+
Sbjct: 371 FLQHHSDKRRPPSAELYSNALPVGL-PLPSHVSLTGESDGGY 411
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,552,715
Number of Sequences: 237096
Number of extensions: 1953742
Number of successful extensions: 5306
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5305
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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