Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5743
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069275-1|AAL39420.1|  455|Drosophila melanogaster GM10438p pro...    31   1.1  
AY052068-1|AAK93492.1|  760|Drosophila melanogaster SD02269p pro...    31   1.1  
AE014134-2272|AAF53237.1| 2470|Drosophila melanogaster CG5092-PA...    31   1.1  
BT016138-1|AAV37023.1|  358|Drosophila melanogaster AT29763p pro...    29   4.4  
BT001261-1|AAN71017.1|  358|Drosophila melanogaster AT02529p pro...    29   4.4  
AE013599-269|AAM70840.1|  358|Drosophila melanogaster CG30156-PA...    29   4.4  
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   4.4  

>AY069275-1|AAL39420.1|  455|Drosophila melanogaster GM10438p
           protein.
          Length = 455

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -3

Query: 371 RRGVGPAMTGSRLTTTLLHCDAPHLEIQMHRVRLQVPVTGAQSTWVHSIPKNTHSKLV 198
           R  V P  T S L   + HCD  H  I+ +R + +VP+     T ++  P   H  L+
Sbjct: 130 RYAVIPLSTNSGLIGWVPHCDTLHTLIRDYRDKKKVPLNQEHRTMLNFAPDYDHLTLM 187


>AY052068-1|AAK93492.1|  760|Drosophila melanogaster SD02269p
           protein.
          Length = 760

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -3

Query: 371 RRGVGPAMTGSRLTTTLLHCDAPHLEIQMHRVRLQVPVTGAQSTWVHSIPKNTHSKLV 198
           R  V P  T S L   + HCD  H  I+ +R + +VP+     T ++  P   H  L+
Sbjct: 435 RYAVIPLSTNSGLIGWVPHCDTLHTLIRDYRDKKKVPLNQEHRTMLNFAPDYDHLTLM 492


>AE014134-2272|AAF53237.1| 2470|Drosophila melanogaster CG5092-PA
            protein.
          Length = 2470

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = -3

Query: 371  RRGVGPAMTGSRLTTTLLHCDAPHLEIQMHRVRLQVPVTGAQSTWVHSIPKNTHSKLV 198
            R  V P  T S L   + HCD  H  I+ +R + +VP+     T ++  P   H  L+
Sbjct: 2145 RYAVIPLSTNSGLIGWVPHCDTLHTLIRDYRDKKKVPLNQEHRTMLNFAPDYDHLTLM 2202


>BT016138-1|AAV37023.1|  358|Drosophila melanogaster AT29763p
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 388 VGVVKCLLFVSVITHCVAGKP-MSETLQRALSAVR 489
           +GVV  L+F+ V  H +AG P  S TL R  SA R
Sbjct: 219 IGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARR 253


>BT001261-1|AAN71017.1|  358|Drosophila melanogaster AT02529p
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 388 VGVVKCLLFVSVITHCVAGKP-MSETLQRALSAVR 489
           +GVV  L+F+ V  H +AG P  S TL R  SA R
Sbjct: 219 IGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARR 253


>AE013599-269|AAM70840.1|  358|Drosophila melanogaster CG30156-PA
           protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 388 VGVVKCLLFVSVITHCVAGKP-MSETLQRALSAVR 489
           +GVV  L+F+ V  H +AG P  S TL R  SA R
Sbjct: 219 IGVVAALVFLFVTMHFIAGAPAYSFTLTRTHSARR 253


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/69 (28%), Positives = 28/69 (40%)
 Frame = -3

Query: 410 NRHFTTPTLCRAARRGVGPAMTGSRLTTTLLHCDAPHLEIQMHRVRLQVPVTGAQSTWVH 231
           N + TT T  +A ++ +    T +  TTT     AP  E Q       VP T   +T   
Sbjct: 257 NGNGTTQTTSQAGKQKIKRKTTTTSTTTTTTTTPAPEPETQPPTQEEPVPATTESTTTTT 316

Query: 230 SIPKNTHSK 204
             P +T  K
Sbjct: 317 QAPASTTPK 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,240,863
Number of Sequences: 53049
Number of extensions: 587014
Number of successful extensions: 1649
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)