Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5738
         (688 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0648 - 26936123-26936447,26936540-26936841,26937043-269379...    28   8.0  
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931...    28   8.0  
01_06_1078 + 34378985-34380064,34380155-34380283,34380362-343804...    28   8.0  

>04_04_0648 -
           26936123-26936447,26936540-26936841,26937043-26937915,
           26937995-26938108,26938285-26938612,26938719-26938843,
           26938926-26938991,26939099-26939166,26939262-26939343,
           26939433-26939546,26939647-26939747,26940429-26940678
          Length = 915

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +1

Query: 463 RSDLFPFSCIVIYIMCCKNF----STPLFLFD-VDKGTFQCNLRQLKVFDW 600
           R+ +  FS I IY    ++     +TPL L+D  +KGT+  NL ++ + DW
Sbjct: 121 RAFVLKFSAIEIYNEVVRDLLSAENTPLRLWDDAEKGTYVENLTEVVLRDW 171


>02_05_0118 -
           25991356-25991686,25991797-25992092,25992405-25993109,
           25993197-25993298,25993519-25993846,25994337-25994461,
           25994555-25994628,25995110-25995191,25995278-25995391,
           25995475-25995575,25995663-25995752,25996316-25996562
          Length = 864

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
 Frame = +1

Query: 463 RSDLFPFSCIVIYIMCCKNF----STPLFLFD-VDKGTFQCNLRQLKVFDW 600
           R+ +  FS I IY    ++     +TPL L+D  +KGT+  NL ++ + DW
Sbjct: 150 RAFVLKFSAIEIYNEVIRDLLSAENTPLRLWDDAEKGTYVENLTEVVLRDW 200


>01_06_1078 +
           34378985-34380064,34380155-34380283,34380362-34380430,
           34380536-34380588,34381309-34381421,34381565-34382132,
           34382520-34382580,34382624-34382665
          Length = 704

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 571 NLRQLKVFDWIGKNLDLVSRIDDQSFWPNILTKIIRDKM 687
           ++R LK F W+  N+ +   +DD +F    + K I  K+
Sbjct: 141 DVRGLKTFSWLPGNMYMRGGVDDTNFEDTEIRKTIMQKI 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,410
Number of Sequences: 37544
Number of extensions: 320218
Number of successful extensions: 537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)