Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5738
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P...    30   3.4  
AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-P...    29   4.5  

>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
           protein.
          Length = 2291

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 243 FVCKDHFYLTC 275
           FVCKDHF+LTC
Sbjct: 264 FVCKDHFHLTC 274


>AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-PA
            protein.
          Length = 3687

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 496  IYIMCCKNFSTPLFLFDVDKGTFQCNLRQLKVFDWIGKNLDLVSRIDD 639
            I I    N++  L+  ++  GT+ C +  L+VFD   ++L  V    D
Sbjct: 3473 IIIRAPPNYTLSLYYTELIFGTYDCEMENLEVFDRTNRSLQRVCSFVD 3520


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,855,368
Number of Sequences: 53049
Number of extensions: 605703
Number of successful extensions: 891
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)