Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5736
         (643 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021217-1|AAX33365.1|  352|Drosophila melanogaster RH63642p pro...    29   7.1  
AE014298-852|AAN09162.1|  352|Drosophila melanogaster CG3774-PB,...    29   7.1  
AE014298-851|AAF46131.1|  352|Drosophila melanogaster CG3774-PA,...    29   7.1  

>BT021217-1|AAX33365.1|  352|Drosophila melanogaster RH63642p
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +3

Query: 450 IKYLCISIAIFLPA*LCNNYQYNYASLLVVFIL----RLMREII*DMVLLVAEHN 602
           +K   I +A+F  A +CNNY +N+   + + ++     LM  +I  +VLL   +N
Sbjct: 67  LKDYVILVALFFGANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYN 121


>AE014298-852|AAN09162.1|  352|Drosophila melanogaster CG3774-PB,
           isoform B protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +3

Query: 450 IKYLCISIAIFLPA*LCNNYQYNYASLLVVFIL----RLMREII*DMVLLVAEHN 602
           +K   I +A+F  A +CNNY +N+   + + ++     LM  +I  +VLL   +N
Sbjct: 67  LKDYVILVALFFGANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYN 121


>AE014298-851|AAF46131.1|  352|Drosophila melanogaster CG3774-PA,
           isoform A protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +3

Query: 450 IKYLCISIAIFLPA*LCNNYQYNYASLLVVFIL----RLMREII*DMVLLVAEHN 602
           +K   I +A+F  A +CNNY +N+   + + ++     LM  +I  +VLL   +N
Sbjct: 67  LKDYVILVALFFGANVCNNYAFNFNIPMPLHMIFRSGSLMANMIMGIVLLKKRYN 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,648,543
Number of Sequences: 53049
Number of extensions: 624430
Number of successful extensions: 1304
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)