Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5736
(643 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 2.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 2.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.3
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 4.4
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 5.8
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 5.8
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 5.8
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 5.8
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 375 IIIFACLICIPRCSTLHRGSIS*TFIKYLCISIAIFL 485
+++ A LI +P + +S +I + C+S IFL
Sbjct: 97 LLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFL 133
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 375 IIIFACLICIPRCSTLHRGSIS*TFIKYLCISIAIFL 485
+++ A LI +P + +S +I + C+S IFL
Sbjct: 97 LLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFL 133
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 375 IIIFACLICIPRCSTLHRGSIS*TFIKYLCISIAIFL 485
+++ A LI +P + +S +I + C+S IFL
Sbjct: 97 LLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFL 133
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 306 KTHKSQFYSTTLAQFLRNAINSQII 380
+T SQ Y+ L++ L +A +SQ++
Sbjct: 477 ETGTSQMYAEKLSELLGHAFHSQVL 501
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 214 PACGIRTPLHRYRYECTGCLI 276
PACG TPL + CL+
Sbjct: 46 PACGSETPLTNIEEKTYQCLL 66
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -3
Query: 416 GTSWNTNQTRKNYNLRIYCVSE 351
G++W N+ RK Y L + +
Sbjct: 170 GSAWQWNEERKQYYLHQFATGQ 191
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 407 WNTNQTRKNYNLRIYCVSEE 348
WN ++T + +N+R S+E
Sbjct: 330 WNEHRTLERHNIRTVAQSDE 349
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 5.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 561 PSLISK*KPQVNLHNYIGNY 502
P +IS P N +NY NY
Sbjct: 79 PKIISNNNPLSNNYNYNNNY 98
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 407 WNTNQTRKNYNLRIYCVSEE 348
WN ++T + +N+R S+E
Sbjct: 330 WNEHRTLERHNIRTVAQSDE 349
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -3
Query: 407 WNTNQTRKNYNLRIYCVSEE 348
WN ++T + +N+R S+E
Sbjct: 330 WNEHRTLERHNIRTVAQSDE 349
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,427
Number of Sequences: 438
Number of extensions: 4902
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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