Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5735
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   135   4e-32
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   135   4e-32
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   116   3e-26
AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942 prot...    29   7.2  
AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942 prot...    29   7.2  
AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942 prot...    29   7.2  
AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942 prot...    29   7.2  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  135 bits (327), Expect = 4e-32
 Identities = 67/103 (65%), Positives = 77/103 (74%)
 Frame = +3

Query: 219 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 398
           VK+IGG KNGG RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLA
Sbjct: 65  VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124

Query: 399 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 527
           GRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGT
Sbjct: 125 GRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGT 167


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  135 bits (327), Expect = 4e-32
 Identities = 67/103 (65%), Positives = 77/103 (74%)
 Frame = +3

Query: 219 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 398
           VK+IGG KNGG RTV LK+ K+ YPT+  ++       FS+H R  R NL  GTV ILLA
Sbjct: 65  VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124

Query: 399 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGT 527
           GRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVIGT
Sbjct: 125 GRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGT 167


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  116 bits (279), Expect = 3e-26
 Identities = 56/89 (62%), Positives = 66/89 (74%)
 Frame = +3

Query: 261 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 440
           VP+K+ K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L
Sbjct: 60  VPIKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVL 119

Query: 441 PSGLLLVTGPFAFNSCPLRRIPQRYVIGT 527
            SGLLLVTGPFA NSCPLRR+ QRYVIGT
Sbjct: 120 ASGLLLVTGPFALNSCPLRRVSQRYVIGT 148


>AY752584-1|AAW32030.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -2

Query: 490 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPAXRMQTVPIFRLGRILRTCLLNGRPPD 317
           G ELK + P  +T    +  +  STTLL   L A ++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 316 EAR 308
           E R
Sbjct: 136 EIR 138


>AY752583-1|AAW32029.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -2

Query: 490 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPAXRMQTVPIFRLGRILRTCLLNGRPPD 317
           G ELK + P  +T    +  +  STTLL   L A ++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 316 EAR 308
           E R
Sbjct: 136 EIR 138


>AY752582-1|AAW32028.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -2

Query: 490 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPAXRMQTVPIFRLGRILRTCLLNGRPPD 317
           G ELK + P  +T    +  +  STTLL   L A ++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 316 EAR 308
           E R
Sbjct: 136 EIR 138


>AY752580-1|AAW32026.1|  167|Drosophila melanogaster CG11942
           protein.
          Length = 167

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -2

Query: 490 GHELKAKGP--VTKSRPLGRIPTSTTLLPACLPAXRMQTVPIFRLGRILRTCLLNGRPPD 317
           G ELK + P  +T    +  +  STTLL   L A ++Q   +  L   +   ++ G+ P+
Sbjct: 76  GEELKPRRPYAITPWDAIFLMVNSTTLLEIILAAKQLQIKGLLELTYNVVANMIRGKTPE 135

Query: 316 EAR 308
           E R
Sbjct: 136 EIR 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,961,714
Number of Sequences: 53049
Number of extensions: 609103
Number of successful extensions: 1410
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)