Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5728
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001699-1|AAN71454.1|  351|Drosophila melanogaster RE60140p pro...    29   4.8  
AE014297-53|AAN13303.2|  652|Drosophila melanogaster CG9795-PB, ...    29   4.8  
AE014297-52|AAX52940.1|  699|Drosophila melanogaster CG9795-PD, ...    29   4.8  
AE014297-51|AAO41508.1|  689|Drosophila melanogaster CG9795-PC, ...    29   4.8  

>BT001699-1|AAN71454.1|  351|Drosophila melanogaster RE60140p
           protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 374 PLYSSIFCTGAQSLLPIYQQFQLE*YQNHFSTRNPYKLGPG 252
           P +  +F T  Q L  + QQ Q +  Q       PY +GPG
Sbjct: 147 PAHKQMFLTQQQQLPQLKQQLQQQRQQEFSKRTQPYGVGPG 187


>AE014297-53|AAN13303.2|  652|Drosophila melanogaster CG9795-PB,
           isoform B protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 374 PLYSSIFCTGAQSLLPIYQQFQLE*YQNHFSTRNPYKLGPG 252
           P +  +F T  Q L  + QQ Q +  Q       PY +GPG
Sbjct: 147 PAHKQMFLTQQQQLPQLKQQLQQQRQQEFSKRTQPYGVGPG 187


>AE014297-52|AAX52940.1|  699|Drosophila melanogaster CG9795-PD,
           isoform D protein.
          Length = 699

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 374 PLYSSIFCTGAQSLLPIYQQFQLE*YQNHFSTRNPYKLGPG 252
           P +  +F T  Q L  + QQ Q +  Q       PY +GPG
Sbjct: 147 PAHKQMFLTQQQQLPQLKQQLQQQRQQEFSKRTQPYGVGPG 187


>AE014297-51|AAO41508.1|  689|Drosophila melanogaster CG9795-PC,
           isoform C protein.
          Length = 689

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -3

Query: 374 PLYSSIFCTGAQSLLPIYQQFQLE*YQNHFSTRNPYKLGPG 252
           P +  +F T  Q L  + QQ Q +  Q       PY +GPG
Sbjct: 184 PAHKQMFLTQQQQLPQLKQQLQQQRQQEFSKRTQPYGVGPG 224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,207,908
Number of Sequences: 53049
Number of extensions: 634886
Number of successful extensions: 1443
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)