Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5728
         (718 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    27   0.23 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    22   6.7  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   6.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = -2

Query: 582 PVTPTMIFLFLRFLVSDVSTFSLVCNAISIEFKIVVSSLNTACAIFE 442
           P+    +F  +  L SDV TF+ +C+ I+     VVS LN   ++F+
Sbjct: 413 PIDTCEMFDSVSILFSDVVTFTEICSRITP--MEVVSMLNAMYSLFD 457


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 666 PRYQHTGPATI 698
           PR++H GP+T+
Sbjct: 139 PRFRHIGPSTL 149


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 645 ISMLLIDPRYQHTGPAT 695
           ISM    PR++H GP+T
Sbjct: 383 ISMQEQIPRFRHIGPST 399


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 588 ILPVTPTMIFLFLRFLVSDVST 523
           +LP+T     +F+  LV +VST
Sbjct: 53  VLPITVIYAVIFVTGLVGNVST 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,762
Number of Sequences: 438
Number of extensions: 4502
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)