Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5727
         (324 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069368-1|AAL39513.1|  640|Drosophila melanogaster LD07457p pro...    29   1.0  
AE014296-2179|AAN11855.2|  640|Drosophila melanogaster CG10984-P...    29   1.0  
AE014296-2178|AAF49889.2|  640|Drosophila melanogaster CG10984-P...    29   1.0  
AE014296-2177|AAN11854.2|  658|Drosophila melanogaster CG10984-P...    29   1.0  
AE014297-3626|AAF56336.1|  462|Drosophila melanogaster CG13634-P...    27   7.3  

>AY069368-1|AAL39513.1|  640|Drosophila melanogaster LD07457p
           protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 234 KLCISW*RQILLLFSYIAHVVS-MPMPFEFCIHQKDDQNTGRIFTNDKSLNELRSHC 67
           KLC++  ++I+ + S  A  +S  P P+  C + KDD+    + T ++   E  + C
Sbjct: 506 KLCMNVEQEIIRVHSKAARSISGQPAPYSVCTYLKDDE-VYNMITPEQDEKEKSARC 561


>AE014296-2179|AAN11855.2|  640|Drosophila melanogaster CG10984-PC,
           isoform C protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 234 KLCISW*RQILLLFSYIAHVVS-MPMPFEFCIHQKDDQNTGRIFTNDKSLNELRSHC 67
           KLC++  ++I+ + S  A  +S  P P+  C + KDD+    + T ++   E  + C
Sbjct: 506 KLCMNVEQEIIRVHSKAARSISGQPAPYSVCTYLKDDE-VYNMITPEQDEKEKSARC 561


>AE014296-2178|AAF49889.2|  640|Drosophila melanogaster CG10984-PA,
           isoform A protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 234 KLCISW*RQILLLFSYIAHVVS-MPMPFEFCIHQKDDQNTGRIFTNDKSLNELRSHC 67
           KLC++  ++I+ + S  A  +S  P P+  C + KDD+    + T ++   E  + C
Sbjct: 506 KLCMNVEQEIIRVHSKAARSISGQPAPYSVCTYLKDDE-VYNMITPEQDEKEKSARC 561


>AE014296-2177|AAN11854.2|  658|Drosophila melanogaster CG10984-PB,
           isoform B protein.
          Length = 658

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 234 KLCISW*RQILLLFSYIAHVVS-MPMPFEFCIHQKDDQNTGRIFTNDKSLNELRSHC 67
           KLC++  ++I+ + S  A  +S  P P+  C + KDD+    + T ++   E  + C
Sbjct: 524 KLCMNVEQEIIRVHSKAARSISGQPAPYSVCTYLKDDE-VYNMITPEQDEKEKSARC 579


>AE014297-3626|AAF56336.1|  462|Drosophila melanogaster CG13634-PA
           protein.
          Length = 462

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 312 RANWVPGPPSSFFLFHVFY 256
           RA W P P S + L+H FY
Sbjct: 61  RAMWEPPPQSPYQLYHSFY 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,509,524
Number of Sequences: 53049
Number of extensions: 232006
Number of successful extensions: 422
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)