Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5715
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein. 40 0.006
BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation ... 40 0.006
BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation ... 40 0.006
BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation ... 40 0.006
BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein. 40 0.006
AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation ... 40 0.006
AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation f... 40 0.006
X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein. 40 0.010
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 33 1.1
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 33 1.1
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 33 1.1
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 33 1.1
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 33 1.1
AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor CNG-c... 31 4.5
D28114-1|BAA05660.1| 183|Homo sapiens MOBP protein. 30 7.8
D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein. 30 7.8
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein. 30 7.8
>CR456958-1|CAG33239.1| 611|Homo sapiens EIF4B protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>BC098437-1|AAH98437.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>BC073154-1|AAH73154.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>BC073139-1|AAH73139.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>BC001097-1|AAH01097.1| 349|Homo sapiens EIF4B protein protein.
Length = 349
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 66 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 110
>AK222528-1|BAD96248.1| 611|Homo sapiens eukaryotic translation
initiation factor 4B variant protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>AB076839-1|BAB82380.1| 611|Homo sapiens eukaryotic initiation
factor 4B protein.
Length = 611
Score = 40.3 bits (90), Expect = 0.006
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P+E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPKEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>X55733-1|CAA39265.1| 611|Homo sapiens initation factor 4B protein.
Length = 611
Score = 39.5 bits (88), Expect = 0.010
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTAAK 319
P +RPKLNL PR+ P E ++ + A +FGGAKPVDTAA+
Sbjct: 328 PPQRPKLNLKPRSTPEEDDSSASTSQSTR--------------AASIFGGAKPVDTAAR 372
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific peptidase
42 protein.
Length = 1316
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 149 ERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVD 307
ERP +L E +P+ G +E+ +AP P PA++ G + VD
Sbjct: 897 ERPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVD 949
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 149 ERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVD 307
ERP +L E +P+ G +E+ +AP P PA++ G + VD
Sbjct: 897 ERPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVD 949
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific protease
42 protein.
Length = 1324
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 149 ERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVD 307
ERP +L E +P+ G +E+ +AP P PA++ G + VD
Sbjct: 897 ERPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVD 949
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens cDNA
FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 149 ERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVD 307
ERP +L E +P+ G +E+ +AP P PA++ G + VD
Sbjct: 897 ERPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVD 949
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific protease
42 protein.
Length = 1325
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 149 ERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVD 307
ERP +L E +P+ G +E+ +AP P PA++ G + VD
Sbjct: 897 ERPPAPVLDMAPAGHPEGDAEPSPGERVEDAAAPKAPGPSPAKEKIGSLRKVD 949
>AF042498-1|AAC04830.1| 1245|Homo sapiens rod photoreceptor
CNG-channel beta subunit protein.
Length = 1245
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
T P RP+ + P+ RET + P P EE +E AP+P P + + P
Sbjct: 188 TAPPGRPQ-EMGPKLQARETPSLPTPIPLQPKEEPKEAPAPEPQPGSQAQTSSLP 241
>D28114-1|BAA05660.1| 183|Homo sapiens MOBP protein.
Length = 183
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKP--ADGAPLEEKQEKQAPKPVP 271
KPR P+ PR+ PR P P ++ P + ++ P+P P
Sbjct: 96 KPRSPPRSERQPRSPPRSERQPRSPPRSERQPRSPPRSERQPRPRP 141
>D28113-1|BAA05659.1| 182|Homo sapiens MOBP protein.
Length = 182
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKP--ADGAPLEEKQEKQAPKPVP 271
KPR P+ PR+ PR P P ++ P + ++ P+P P
Sbjct: 96 KPRSPPRSERQPRSPPRSERQPRSPPRSERQPRSPPRSERQPRPRP 141
>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
Length = 1460
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEE 238
T P P L LLP P E E P +P +P E
Sbjct: 876 TTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESE 909
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,390,509
Number of Sequences: 237096
Number of extensions: 1101107
Number of successful extensions: 4239
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4205
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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