Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5715
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.17
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 33 0.17
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 31 0.51
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 4.8
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 4.8
Z83105-9|CAB05489.1| 199|Caenorhabditis elegans Hypothetical pr... 28 6.3
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 27 8.4
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 27 8.4
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 27 8.4
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTK--PADGAPLEEKQEKQAPKPVP 271
PR + L P TVP TEAP P P E + +AP+ VP
Sbjct: 631 PRTEVSMTLPPETVPPNTEAPRTEVPMTVPPRTEPPKTEAPRTVP 675
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTK--PADG-----APLEEKQEKQAPKPVPAEKVFGGAKP 301
PR P PRTVP +TEAP P G P+ E + + P+ P P
Sbjct: 661 PRTEPPKTEAPRTVPPKTEAPMTEVPMTGPSRTEVPMTEPPKTEQPRTAPPRTEVSMTLP 720
Query: 302 VDT 310
+T
Sbjct: 721 PET 723
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQ--APKPVP 271
P E PK P+T P +TE PT P +Q+ + AP P P
Sbjct: 404 PTEPPKTEP-PKTTPPKTEPPTTEPPNIPYCWQQQSRLFAPSPPP 447
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAP--TKPADGAPLEEKQEKQAPKPVP 271
PR P PRTV +TEAP P P+ E + P P
Sbjct: 576 PRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEP 620
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 146 RERPKLNLLPRTVPRETEAP-TKPADGAPLEEKQEKQAPKPV 268
R P PRT+P TEAP T+P P E + +AP+ V
Sbjct: 552 RTEPPRTEPPRTIPPRTEAPRTEP----PRTEPPKTEAPRTV 589
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDT 310
+P+ + + PRT P TEAP P+ E + + P+ P P +T
Sbjct: 590 RPKTEAPMTVPPRTEPPMTEAPRTE---VPMTEPPKTEPPRTAPPRTEVSMTLPPET 643
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 173 PRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPA 274
P +VP ET AP AD P ++ P P PA
Sbjct: 545 PSSVPEETPAPAPAADETPAPAPAAEETPAPAPA 578
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ +PK N P P+ P KP P E + K PKP P K KP
Sbjct: 190 KPKPKPKPNPKPEPKPKPKPEP-KPK---PKPEPKPKPKPKPKPKPKPNPNPKP 239
Score = 30.7 bits (66), Expect = 0.90
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
KP+ +PK P+ P+ P + P + + K PKP P K
Sbjct: 184 KPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPK 230
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
KP +PK P+ P+ P + P E + K PKP P K
Sbjct: 208 KPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPK 254
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ +P P+ P+ P + P + + K PKP P K KP
Sbjct: 176 KPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKP 229
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/54 (25%), Positives = 23/54 (42%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ +P+ P+ P+ P P + + K P+P P K+ KP
Sbjct: 212 KPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKP 265
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP +PK P+ P+ P P + + K PKP P K KP
Sbjct: 180 KPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKP 233
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ +PK N P+ P+ P + P + + + PKP K KP
Sbjct: 226 KPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKP 279
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ +P+ P+ P+ P P + + K PKP P K KP
Sbjct: 168 KPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKP 221
Score = 28.3 bits (60), Expect = 4.8
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ PK P+ P+ P P E + K P+P P K KP
Sbjct: 178 KPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKP 231
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
+P+ +PK P+ P+ P + P + + K PKP P K
Sbjct: 210 EPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPK 256
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAP-TKP-ADGAPLEEKQEKQAPKPVPAEK 280
KP +P+ N +P P+ P ++P + P + + K PKP P K
Sbjct: 274 KPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPK 322
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/54 (29%), Positives = 20/54 (37%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP+ PK P P+ P P E + K P+P P K KP
Sbjct: 170 KPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKP 223
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
KP +PK P+ P+ P + P + + K PKP P + KP
Sbjct: 172 KPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKP 225
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/54 (27%), Positives = 21/54 (38%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKP 301
K +PK L P+ P P + P + + PKP P K +KP
Sbjct: 260 KSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKP 313
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPV 304
KP+ PK L P+ +P P P PKP+P K KP+
Sbjct: 73 KPKPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPKPKPMPKHKPKPFPKPM 127
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/54 (25%), Positives = 21/54 (38%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPV 304
P+ +PK P P+ P P+ + K PKP P +F P+
Sbjct: 188 PKHKPKPFPKPMLFPKPMPIPKPMPFPKPMPKPMPKHKPKPFPKPMLFPKPMPI 241
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/48 (27%), Positives = 19/48 (39%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
+KP +PK P+ +P+ P + K PKP P K
Sbjct: 6 SKPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPK 53
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPV 304
KP+ P +P++ P+ P+ P+ + + K PKP+P K KP+
Sbjct: 11 KPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPK--PKPMPKHKPKPFPKPM 63
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 143 PRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEK 250
P ERP+LNL PRT K + + +QEK
Sbjct: 169 PAERPRLNLKPRTTDAAEIEARKKQEEEETKRRQEK 204
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTA 313
T + PK PRT PR + P P A +E + E A +P P + +PV A
Sbjct: 463 TPAPKTPKTPKTPRT-PRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEA 520
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTA 313
T + PK PRT PR + P P A +E + E A +P P + +PV A
Sbjct: 413 TPAPKTPKTPKTPRT-PRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEA 470
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTA 313
T + PK PRT PR + P P A +E + E A +P P + +PV A
Sbjct: 463 TPAPKTPKTPKTPRT-PRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEA 520
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 137 TKPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVFGGAKPVDTA 313
T + PK PRT PR + P P A +E + E A +P P + +PV A
Sbjct: 463 TPAPKTPKTPKTPRT-PRTPKTPRTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEA 520
>Z83105-9|CAB05489.1| 199|Caenorhabditis elegans Hypothetical
protein F14H3.9 protein.
Length = 199
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 530 SIYKYTLITFLLEVGILTFFTKMTSKHYWCW*W 628
+I+KY +++L+ F T M + WC+ W
Sbjct: 130 NIFKYKCPSYVLQPNDTAFLTSMFTIEKWCYKW 162
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEKVF 286
KP ++PK LP+ P+ E P KPA + E+ +P E F
Sbjct: 321 KPTDKPKPKDLPKEEPKPAE-PPKPAAPKKWKPPWEEDPDEPEEPEADF 368
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
K RER + RT ++++ +P+ LE+K EK+ + P K
Sbjct: 1124 KERERRRQRDRDRTEQKKSDREKEPSKKRKLEKKDEKEKDRREPERK 1170
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 166 FVTAHCASRDRSPHQARRRSAPGGKTRETGSE 261
+ + + +DR+P +ARRR G TR+ SE
Sbjct: 868 YKSVNSKKKDRAPEEARRRKKAGVCTRDKFSE 899
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 140 KPRERPKLNLLPRTVPRETEAPTKPADGAPLEEKQEKQAPKPVPAEK 280
K RER + RT ++++ +P+ LE+K EK+ + P K
Sbjct: 1124 KERERRRQRDRDRTEQKKSDREKEPSKKRKLEKKDEKEKDRREPERK 1170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,011,087
Number of Sequences: 27780
Number of extensions: 159835
Number of successful extensions: 777
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -