Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5714
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    36   0.031
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    32   0.29 
AF040647-2|AAB94995.3|  299|Caenorhabditis elegans Hypothetical ...    30   1.2  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z68216-3|CAA92462.1|  126|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = +2

Query: 41  VEMPVVDTETCIRSYSEFFVRFTSEYTYCAGYRDGT-SVCNGDSGGGMVFKFGESWYLRG 217
           + +P++ T  C  S   +  R       CAGY  G    C GDSGG ++      W L G
Sbjct: 199 IHVPLLSTLFC-SSLPNYIGRIHLPSMLCAGYSYGKIDSCQGDSGGPLMCARDGHWELTG 257

Query: 218 LVSLSV 235
           +VS  +
Sbjct: 258 VVSWGI 263


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 119 TYCAGYRDGTSVCNGDSGGGMVFKFGES 202
           ++C    +  +VC+GDSGGG+ F   +S
Sbjct: 258 SFCTAEEEDKNVCSGDSGGGLTFHQSDS 285


>AF040647-2|AAB94995.3|  299|Caenorhabditis elegans Hypothetical
           protein F54D12.5 protein.
          Length = 299

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 60  TLKPASGLTANSSSDLHRSTLTAPDIEMEHRSVTATVVAEWSSSL-ARAGTSG 215
           T K   G+   + ++LH +T  +P +   H+   +T     SSSL A AGT G
Sbjct: 173 TDKIMRGIDVETLTNLHTTTEPSPPLPRHHQIQASTTAGATSSSLSAAAGTRG 225


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 78   GLTANSSSDL-HRSTLTAPDIEMEHRSVTATVVAEWSSSLARAGTSGAWCRSPWPGRTNA 254
            G T  SSS +   S  T P         T T  +  S+S   + TSGA   S  PG T  
Sbjct: 960  GSTEGSSSPIPSTSQNTNPSTSSGSSMSTQTPQSSQSTSPVESSTSGATSSSGSPGTTLT 1019

Query: 255  DVTPA 269
             ++P+
Sbjct: 1020 SISPS 1024


>Z68216-3|CAA92462.1|  126|Caenorhabditis elegans Hypothetical
           protein F27C8.4 protein.
          Length = 126

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/80 (23%), Positives = 35/80 (43%)
 Frame = -1

Query: 259 TSAFVLPGHGERHQAPEVPALAKLEDHSATTVAVTDRCSISISGAVSVLRCKSDEEFAVR 80
           +SAFV+P + ++  A ++  +AK    S  + A  + C   +  A +   C  DE     
Sbjct: 15  SSAFVVPQNADQCGAVDITKMAKRYVPSQNSDATCEICLDLVLIAETYAEC--DEAIVQH 72

Query: 79  PDAGFSVNHGHLHQAELFCR 20
               + V H   H ++  C+
Sbjct: 73  HMDAYCVEHVKNHASQALCK 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,023,711
Number of Sequences: 27780
Number of extensions: 327736
Number of successful extensions: 887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)