Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5710
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.19 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.45 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.2  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +3

Query: 519 AVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHP---ASGLGPVVTSQTTSWKILTERG 689
           ++  +++HR        C P   +L  I + P HP   ++ L   +T+ TT+    T   
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPASSTSLPATITTTTTTTTTTTATA 121

Query: 690 YSFTTTAEREIVR 728
            +  TT    +++
Sbjct: 122 AATATTTATGLIK 134


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.45
 Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
 Frame = +1

Query: 415 EAPLNPKA--NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG-DGVSHTV 585
           E PL+P    + +K T+    T    A      AV      G       DSG DG + T 
Sbjct: 440 ETPLDPVVVISNDKSTEFFLATVVEEAA-CRFSAVAQAQLGGERQNGRKDSGYDGAASTA 498

Query: 586 PIYEGYALPHAILRLDLARS*PHRLPHGRSSPSAATRSLPPPSG 717
            I+E     +         S P   P   S+PS++T S PP  G
Sbjct: 499 VIHEPVVETN---------SSPSPNPRIASAPSSSTSSSPPAKG 533



 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 682 SVRIFHEVVCEVTTGPSPD 626
           S  + HE V E  + PSP+
Sbjct: 496 STAVIHEPVVETNSSPSPN 514


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 376  LRVAPEEHPVLLTEAPLNPKANREKM 453
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 664 EVVCEVTTGPSPDAGWR 614
           E+ C+VT  P P   WR
Sbjct: 329 EIKCDVTGTPPPPLVWR 345


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 579 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 487
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 688 PRSVRIFHEVVCEVTTGPSPD 626
           P S+RI  +   ++TT P+P+
Sbjct: 811 PNSLRILLKRFLDITTPPTPN 831


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 139 GMCKAGFAGD 168
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,111
Number of Sequences: 438
Number of extensions: 5819
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)