SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5707
         (720 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998    254   5e-68
03_01_0034 + 318432-318825,318902-319851                              252   3e-67
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635...   252   3e-67
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349    252   3e-67
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611...   251   4e-67
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467          251   4e-67
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379    250   8e-67
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505...   246   2e-65
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918...   110   9e-25
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257...   110   1e-24
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788...   109   3e-24
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...   108   4e-24
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324...    46   2e-05
02_05_1127 + 34292894-34293284,34293948-34295443                       29   2.8  
08_02_1050 + 23949828-23949981,23950083-23950534,23951599-239516...    29   3.7  
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743...    29   4.9  
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622     29   4.9  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    28   6.5  
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438...    28   6.5  
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413...    28   8.6  
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280     28   8.6  
03_01_0235 - 1842909-1843498,1844380-1844569                           28   8.6  

>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
          Length = 444

 Score =  254 bits (622), Expect = 5e-68
 Identities = 112/128 (87%), Positives = 124/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           PRGLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 361 LVSEYQQY 384
           LV+EYQQY
Sbjct: 418 LVAEYQQY 425


>03_01_0034 + 318432-318825,318902-319851
          Length = 447

 Score =  252 bits (616), Expect = 3e-67
 Identities = 112/128 (87%), Positives = 122/128 (95%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIP 357

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           P GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 361 LVSEYQQY 384
           LVSEYQQY
Sbjct: 418 LVSEYQQY 425


>01_06_1060 +
           34162161-34162554,34162613-34162675,34163262-34163531,
           34163944-34164623
          Length = 468

 Score =  252 bits (616), Expect = 3e-67
 Identities = 111/128 (86%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 319 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 378

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           PRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 379 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 438

Query: 361 LVSEYQQY 384
           LVSEYQQY
Sbjct: 439 LVSEYQQY 446


>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
          Length = 447

 Score =  252 bits (616), Expect = 3e-67
 Identities = 111/128 (86%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           PRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 361 LVSEYQQY 384
           LVSEYQQY
Sbjct: 418 LVSEYQQY 425


>05_04_0306 +
           20058640-20059159,20060406-20060819,20060921-20061190,
           20062179-20062849
          Length = 624

 Score =  251 bits (615), Expect = 4e-67
 Identities = 110/128 (85%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 478 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 537

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           PRGL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 538 PRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 597

Query: 361 LVSEYQQY 384
           LVSEYQQY
Sbjct: 598 LVSEYQQY 605


>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
          Length = 447

 Score =  251 bits (615), Expect = 4e-67
 Identities = 111/128 (86%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           P GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 361 LVSEYQQY 384
           LV+EYQQY
Sbjct: 418 LVAEYQQY 425


>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
          Length = 446

 Score =  250 bits (612), Expect = 8e-67
 Identities = 111/128 (86%), Positives = 123/128 (96%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           P GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417

Query: 361 LVSEYQQY 384
           LV+EYQQY
Sbjct: 418 LVAEYQQY 425


>03_05_0575 +
           25747813-25748206,25748567-25748614,25750296-25750565,
           25750658-25751334
          Length = 462

 Score =  246 bits (601), Expect = 2e-65
 Identities = 108/128 (84%), Positives = 121/128 (94%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           NMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIP
Sbjct: 314 NMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIP 373

Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
           P GL MA+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMND
Sbjct: 374 PVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMND 433

Query: 361 LVSEYQQY 384
           LV+EYQQY
Sbjct: 434 LVAEYQQY 441


>07_03_0994 +
           23190344-23190456,23191367-23191581,23191663-23191862,
           23192420-23192928,23193048-23193363
          Length = 450

 Score =  110 bits (265), Expect = 9e-25
 Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           +MMA CDPRHG+Y+    ++RG +  K+V+  +  I+ K +  FV+W P   K  +   P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQP 359

Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
           P          ++ A   I N+TA+ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419

Query: 337 EAESNMNDLVSEYQQ 381
           EA  ++  L  +Y++
Sbjct: 420 EAREDLAALEKDYEE 434


>03_05_0974 +
           29324025-29324117,29325064-29325298,29325385-29325755,
           29325864-29326520
          Length = 451

 Score =  110 bits (264), Expect = 1e-24
 Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           +MMA CDPRHG+Y+    ++RG +  K+V+  +  I+ K +  FV+W P   K  +   P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 359

Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
           P          ++ A   I NST++ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFS 419

Query: 337 EAESNMNDLVSEYQQ 381
           EA  ++  L  +Y++
Sbjct: 420 EAREDLAALEKDYEE 434


>11_02_0058 +
           7879859-7879951,7880844-7881078,7881165-7881535,
           7881648-7882304
          Length = 451

 Score =  109 bits (261), Expect = 3e-24
 Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           +MMA CDPRHG+Y+    ++RG +  K+V+  +  I+ K +  FV+W P   K  +   P
Sbjct: 300 SMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 359

Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
           P          ++ A   I NST++ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFS 419

Query: 337 EAESNMNDLVSEYQQ 381
           EA  ++  L  +Y++
Sbjct: 420 EAREDLAALEKDYEE 434


>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score =  108 bits (260), Expect = 4e-24
 Identities = 48/135 (35%), Positives = 81/135 (60%), Gaps = 8/135 (5%)
 Frame = +1

Query: 1   NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
           ++MA CDPRHG+Y+    ++RG +  K+V+  + +I+ + +  FV+W P   K  +   P
Sbjct: 381 SVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQP 440

Query: 181 PRGL--------KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
           P  +        + A   I N+TA+ E+F RI  +F  M+ ++AF+HWY GEGM+E EF+
Sbjct: 441 PTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFS 500

Query: 337 EAESNMNDLVSEYQQ 381
           EA  ++  L  +Y++
Sbjct: 501 EAREDLAALEKDYEE 515


>05_01_0412 -
           3248405-3248458,3248533-3248637,3248950-3249078,
           3249279-3249353,3249520-3249624,3249714-3249767,
           3249970-3250370,3250583-3250694,3250886-3251086,
           3251844-3251972
          Length = 454

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
 Frame = +1

Query: 34  RYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFI 213
           +Y+++  I +G +   +V E +  I+ +    F+EW P +++ +       GL +A    
Sbjct: 318 KYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVS-------GLMLA---- 366

Query: 214 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 378
            N T+I+ LF +   Q+  + +++AFL  Y      E  D  EF E+   +  LV EY+
Sbjct: 367 -NHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424


>02_05_1127 + 34292894-34293284,34293948-34295443
          Length = 628

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 421 RQTLRPRRRWPPGTVGTRRQG 359
           R T +P+RRWPPG+ G   +G
Sbjct: 83  RATGQPKRRWPPGSSGGGARG 103


>08_02_1050 +
           23949828-23949981,23950083-23950534,23951599-23951631,
           23952069-23952179,23953175-23953348
          Length = 307

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 439 SPAPAPRQTLRPRRRWPP 386
           SP+P+P  +  P RRWPP
Sbjct: 27  SPSPSPLLSRAPSRRWPP 44


>07_03_1027 -
           23371826-23372006,23372110-23372171,23372595-23374335,
           23374609-23374704,23374967-23375043,23376807-23377307
          Length = 885

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 442 RSPAPAPRQTLRPRRRWPPGTVGT 371
           R+PAP PR+ +R R R  P  V T
Sbjct: 31  RAPAPPPREVVRVRLRLTPAPVAT 54


>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
          Length = 501

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 368 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 246
           E RS  LL A  N +  +P+ + +      LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 162 RRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
           RR  H  +W  +G H  R+ H H      H G
Sbjct: 565 RRHHHPPAWDVEGHHHDRQQHSHEAGRNHHRG 596


>02_05_1298 -
           35542250-35542831,35543218-35543410,35543511-35543827,
           35544144-35544186,35545845-35545900,35546028-35546102,
           35546249-35546345,35546422-35546546,35547063-35547167,
           35547295-35547432,35547758-35547831,35547995-35548065,
           35548168-35548363,35548482-35548572,35549264-35549342,
           35549431-35549491,35549745-35549814,35549913-35549987,
           35550119-35550194,35550403-35550489,35550744-35550880,
           35551000-35551063,35551351-35551415
          Length = 958

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 LSASVNSISSMPSPVYQCKKALRLNIAVN 261
           L+AS N+IS +P  +  C K  RLN+  N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170


>08_01_0469 -
           4127950-4127988,4127989-4128264,4128845-4130861,
           4131134-4131987
          Length = 1061

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +1

Query: 70  MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 240
           ++MKE+DE++  +  +++ Y ++ I  N       + PR L M    A  +G    + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178

Query: 241 FKRI 252
            K +
Sbjct: 179 MKML 182


>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
          Length = 434

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 368 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 246
           E RS  LL A  N +  +PS + +      LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304


>03_01_0235 - 1842909-1843498,1844380-1844569
          Length = 259

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +3

Query: 84  GRRTNA*HPEQELLILRGMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPG 236
           GRR     P+  L+++ G   QQ+++RR R  +  SQ+GR    + H H G
Sbjct: 123 GRRPRQRLPDPVLILVGGAVRQQQQERR-RWRTKGSQEGR---SRRHGHGG 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,845,583
Number of Sequences: 37544
Number of extensions: 304384
Number of successful extensions: 1204
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -