Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5707
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 272 2e-73
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 272 2e-73
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 271 3e-73
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 271 3e-73
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 270 9e-73
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 269 1e-72
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 149 3e-36
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 149 3e-36
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 109 3e-24
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 109 3e-24
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 109 3e-24
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 109 3e-24
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 107 1e-23
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 107 1e-23
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 107 1e-23
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 107 1e-23
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 106 2e-23
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 105 3e-23
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 105 3e-23
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 102 3e-22
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 101 5e-22
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 101 5e-22
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 93 2e-19
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 4e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 5.8
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 5.8
Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical pr... 28 7.7
U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein. 28 7.7
U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein. 28 7.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 272 bits (667), Expect = 2e-73
Identities = 124/128 (96%), Positives = 128/128 (100%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
LVSEYQQY
Sbjct: 418 LVSEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 272 bits (666), Expect = 2e-73
Identities = 123/128 (96%), Positives = 128/128 (100%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
L+SEYQQY
Sbjct: 418 LISEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 271 bits (665), Expect = 3e-73
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
LVSEYQQY
Sbjct: 418 LVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 271 bits (665), Expect = 3e-73
Identities = 125/128 (97%), Positives = 127/128 (99%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
LVSEYQQY
Sbjct: 418 LVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 270 bits (661), Expect = 9e-73
Identities = 122/128 (95%), Positives = 128/128 (100%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
L+SEYQQY
Sbjct: 418 LISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 269 bits (660), Expect = 1e-72
Identities = 122/128 (95%), Positives = 128/128 (100%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
NMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIP
Sbjct: 298 NMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIP 357
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
PRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 361 LVSEYQQY 384
LVSEYQQY
Sbjct: 418 LVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (360), Expect = 3e-36
Identities = 69/128 (53%), Positives = 97/128 (75%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIP 355
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +ND
Sbjct: 356 SRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVND 412
Query: 361 LVSEYQQY 384
L+SE+QQY
Sbjct: 413 LISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 149 bits (360), Expect = 3e-36
Identities = 69/128 (53%), Positives = 97/128 (75%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP
Sbjct: 297 NIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIP 355
Query: 181 PRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 360
RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +ND
Sbjct: 356 SRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVND 412
Query: 361 LVSEYQQY 384
L+SE+QQY
Sbjct: 413 LISEFQQY 420
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 109 bits (261), Expect = 3e-24
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 420 EAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 109 bits (261), Expect = 3e-24
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 299 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 358
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 359 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 418
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 419 EAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 109 bits (261), Expect = 3e-24
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 420 EAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 109 bits (261), Expect = 3e-24
Identities = 50/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 420 EAREDLAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 107 bits (256), Expect = 1e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 107 bits (256), Expect = 1e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 107 bits (256), Expect = 1e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 107 bits (256), Expect = 1e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 106 bits (254), Expect = 2e-23
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
+ M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K + P
Sbjct: 300 SQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQP 359
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P L+ A + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 360 PTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS 419
Query: 337 EAESNMNDLVSEYQQ 381
EA +M L +Y++
Sbjct: 420 EAREDMAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (252), Expect = 3e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + P
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 105 bits (252), Expect = 3e-23
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + P
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQP 357
Query: 181 PR--------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFT
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFT 417
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 418 EAREDLAALEKDYEE 432
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 103 bits (248), Expect = 1e-22
Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 180
N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K + P
Sbjct: 295 NQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQP 354
Query: 181 PRGLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
P + A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+
Sbjct: 355 PTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFS 414
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y++
Sbjct: 415 EAREDLAALEKDYEE 429
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 102 bits (244), Expect = 3e-22
Identities = 46/133 (34%), Positives = 76/133 (57%), Gaps = 8/133 (6%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR 186
M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K + PP
Sbjct: 307 MVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPT 366
Query: 187 --------GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 342
L+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 367 VVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 426
Query: 343 ESNMNDLVSEYQQ 381
++ L +Y++
Sbjct: 427 REDLAALEKDYEE 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 101 bits (242), Expect = 5e-22
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR 186
M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 308 MVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPT 367
Query: 187 GLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 342
+ + I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 368 VVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 427
Query: 343 ESNMNDLVSEYQQ 381
+M L +Y++
Sbjct: 428 REDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 101 bits (242), Expect = 5e-22
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Frame = +1
Query: 7 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR 186
M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 280 MVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPT 339
Query: 187 GLK--------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 342
+ + I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA
Sbjct: 340 VVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA 399
Query: 343 ESNMNDLVSEYQQ 381
+M L +Y++
Sbjct: 400 REDMAALEKDYEE 412
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Frame = +1
Query: 1 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---C 171
N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W P K +
Sbjct: 303 NQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQA 362
Query: 172 DIPPRG-----LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 336
I G + A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF
Sbjct: 363 PITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFM 422
Query: 337 EAESNMNDLVSEYQQ 381
EA ++ L +Y +
Sbjct: 423 EARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +1
Query: 211 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 381
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +1
Query: 169 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 324
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 325 MEFTEAESNMNDLVSEY 375
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +1
Query: 169 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 324
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 325 MEFTEAESNMNDLVSEY 375
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +1
Query: 169 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 324
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 325 MEFTEAESNMNDLVSEY 375
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81017-3|CAB54257.1| 629|Caenorhabditis elegans Hypothetical
protein F58A3.1c protein.
Length = 629
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 135 GMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
GM P + HS SQ +H +H PG++Q H G
Sbjct: 477 GMQPPPGQQHMPPHSMG-SQMPTSMHNPMHMPPGSMQGHGG 516
>Z81017-2|CAB02672.1| 578|Caenorhabditis elegans Hypothetical
protein F58A3.1b protein.
Length = 578
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 135 GMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
GM P + HS SQ +H +H PG++Q H G
Sbjct: 426 GMQPPPGQQHMPPHSMG-SQMPTSMHNPMHMPPGSMQGHGG 465
>Z81017-1|CAB02669.1| 592|Caenorhabditis elegans Hypothetical
protein F58A3.1a protein.
Length = 592
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 135 GMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
GM P + HS SQ +H +H PG++Q H G
Sbjct: 440 GMQPPPGQQHMPPHSMG-SQMPTSMHNPMHMPPGSMQGHGG 479
>U80221-1|AAB38367.1| 579|Caenorhabditis elegans F58A3.1b protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 135 GMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
GM P + HS SQ +H +H PG++Q H G
Sbjct: 427 GMQPPPGQQHMPPHSMG-SQMPTSMHNPMHMPPGSMQGHGG 466
>U80220-1|AAB38366.1| 592|Caenorhabditis elegans F58A3.1a protein.
Length = 592
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 135 GMDPQQREDRRVRHSSSWSQDGRHLHRKLHRHPGAVQAHLG 257
GM P + HS SQ +H +H PG++Q H G
Sbjct: 440 GMQPPPGQQHMPPHSMG-SQMPTSMHNPMHMPPGSMQGHGG 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,754,273
Number of Sequences: 27780
Number of extensions: 244169
Number of successful extensions: 961
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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