Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5703
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        27   0.78 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   3.2  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   5.5  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 705 QYSRMVPPGLDLPSQSASHGRRHTIERPRHGD 610
           +Y R+V  GLD    S + G RH+I   R+GD
Sbjct: 19  RYRRIVS-GLDSTRGSPAPGSRHSIRHGRNGD 49


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +1

Query: 253 NARSEQLIPT*CNLLGNH*--LYSKLRTDISRWMAHLRRRCLRVLGLNTCWAVNSSTHLS 426
           +A S++ +   CN LG+H   L   +  D S  + H          LNTC    S THL 
Sbjct: 366 SAASQRFMLRSCNSLGDHIPPLPPTIAFDPSVLLDHHLLDSSE--SLNTCRLHGSPTHLH 423

Query: 427 NKKSSLKVLHREYESSSIL 483
           N +S     H  +   S L
Sbjct: 424 NHRSGGGGRHHHHHHHSAL 442


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 702 YSRMVPPGLDLPSQSASHGRRHTIERPRHGDGSILDG 592
           Y R+V PG+DL   +   G    I +  +  GS++ G
Sbjct: 132 YERVVSPGIDLSGLTLQSGPSRLI-KDEYTPGSVVGG 167


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 564 DRCEYEHDGRHPGYFRLRDGGVRWCVFAHEKRF 662
           DRCE  +D  H  +          C+  HE RF
Sbjct: 345 DRCELANDLLHKFHLPKEQVATWVCIAYHESRF 377


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,726
Number of Sequences: 2352
Number of extensions: 14745
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)