Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5703
         (725 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC100827-1|AAI00828.1|  727|Homo sapiens synaptic vesicle glycop...    36   0.11 
BC100826-1|AAI00827.1|  727|Homo sapiens synaptic vesicle glycop...    36   0.11 
BC100825-1|AAI00826.1|  727|Homo sapiens synaptic vesicle glycop...    36   0.11 
BC100824-1|AAI00825.1|  727|Homo sapiens synaptic vesicle glycop...    36   0.11 
Y17801-1|CAB89809.1|  477|Homo sapiens glucose transporter 8 pro...    31   3.2  
BC019043-1|AAH19043.1|  477|Homo sapiens solute carrier family 2...    31   3.2  
AL445222-5|CAH72918.1|  477|Homo sapiens solute carrier family 2...    31   3.2  
AL445222-4|CAH72917.1|  411|Homo sapiens solute carrier family 2...    31   3.2  
AJ245937-1|CAB75702.1|  477|Homo sapiens glucose transporter pro...    31   3.2  
K03195-1|AAA52571.1|  492|Homo sapiens SGLT1 protein.                  30   7.3  
BC121804-1|AAI21805.1|  492|Homo sapiens solute carrier family 2...    30   7.3  
BC118590-1|AAI18591.1|  492|Homo sapiens solute carrier family 2...    30   7.3  
BC034394-1|AAH34394.1|  322|Homo sapiens hypothetical protein MG...    30   7.3  
AB208987-1|BAD92224.1|  517|Homo sapiens solute carrier family 2...    30   7.3  

>BC100827-1|AAI00828.1|  727|Homo sapiens synaptic vesicle
           glycoprotein 2C protein.
          Length = 727

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 599 WMASIMFIFAPIAVFIYGIAADKFGRKNALLCC 501
           W+ SI+++   +  F +G  ADK GRK +LL C
Sbjct: 192 WLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC 224


>BC100826-1|AAI00827.1|  727|Homo sapiens synaptic vesicle
           glycoprotein 2C protein.
          Length = 727

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 599 WMASIMFIFAPIAVFIYGIAADKFGRKNALLCC 501
           W+ SI+++   +  F +G  ADK GRK +LL C
Sbjct: 192 WLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC 224


>BC100825-1|AAI00826.1|  727|Homo sapiens synaptic vesicle
           glycoprotein 2C protein.
          Length = 727

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 599 WMASIMFIFAPIAVFIYGIAADKFGRKNALLCC 501
           W+ SI+++   +  F +G  ADK GRK +LL C
Sbjct: 192 WLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC 224


>BC100824-1|AAI00825.1|  727|Homo sapiens synaptic vesicle
           glycoprotein 2C protein.
          Length = 727

 Score = 36.3 bits (80), Expect = 0.11
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -1

Query: 599 WMASIMFIFAPIAVFIYGIAADKFGRKNALLCC 501
           W+ SI+++   +  F +G  ADK GRK +LL C
Sbjct: 192 WLGSIVYLGMMVGAFFWGGLADKVGRKQSLLIC 224


>Y17801-1|CAB89809.1|  477|Homo sapiens glucose transporter 8
           protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 635 PSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIP 492
           P    + +   SW  +++ + A     + G   D+ GRK +LL CS+P
Sbjct: 59  PPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVP 106


>BC019043-1|AAH19043.1|  477|Homo sapiens solute carrier family 2,
           (facilitated glucose transporter) member 8 protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 635 PSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIP 492
           P    + +   SW  +++ + A     + G   D+ GRK +LL CS+P
Sbjct: 59  PPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVP 106


>AL445222-5|CAH72918.1|  477|Homo sapiens solute carrier family 2,
           (facilitated glucose transporter) member 8 protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 635 PSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIP 492
           P    + +   SW  +++ + A     + G   D+ GRK +LL CS+P
Sbjct: 59  PPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVP 106


>AL445222-4|CAH72917.1|  411|Homo sapiens solute carrier family 2,
           (facilitated glucose transporter) member 8 protein.
          Length = 411

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 635 PSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIP 492
           P    + +   SW  +++ + A     + G   D+ GRK +LL CS+P
Sbjct: 59  PPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVP 106


>AJ245937-1|CAB75702.1|  477|Homo sapiens glucose transporter
           protein.
          Length = 477

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 635 PSNAPVTETEVSWMASIMFIFAPIAVFIYGIAADKFGRKNALLCCSIP 492
           P    + +   SW  +++ + A     + G   D+ GRK +LL CS+P
Sbjct: 59  PPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVP 106


>K03195-1|AAA52571.1|  492|Homo sapiens SGLT1 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = -1

Query: 692 WYRQGWISPHKALLMGEDTPSNAPVTETEV-SWMASIMFIFAPIAVFIYGIAADKFGRKN 516
           +Y Q W+  H+    GE   S  P T T + S   +I  +   I  F  G+  ++FGR+N
Sbjct: 43  FYNQTWV--HR---YGE---SILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRN 94

Query: 515 ALLCCSIPIAVSIDDDSYSRC-KTFKLLFL 429
           ++L  ++   VS     +S+  K+F++L L
Sbjct: 95  SMLMMNLLAFVSAVLMGFSKLGKSFEMLIL 124


>BC121804-1|AAI21805.1|  492|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = -1

Query: 692 WYRQGWISPHKALLMGEDTPSNAPVTETEV-SWMASIMFIFAPIAVFIYGIAADKFGRKN 516
           +Y Q W+  H+    GE   S  P T T + S   +I  +   I  F  G+  ++FGR+N
Sbjct: 43  FYNQTWV--HR---YGE---SILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRN 94

Query: 515 ALLCCSIPIAVSIDDDSYSRC-KTFKLLFL 429
           ++L  ++   VS     +S+  K+F++L L
Sbjct: 95  SMLMMNLLAFVSAVLMGFSKLGKSFEMLIL 124


>BC118590-1|AAI18591.1|  492|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 protein.
          Length = 492

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = -1

Query: 692 WYRQGWISPHKALLMGEDTPSNAPVTETEV-SWMASIMFIFAPIAVFIYGIAADKFGRKN 516
           +Y Q W+  H+    GE   S  P T T + S   +I  +   I  F  G+  ++FGR+N
Sbjct: 43  FYNQTWV--HR---YGE---SILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRN 94

Query: 515 ALLCCSIPIAVSIDDDSYSRC-KTFKLLFL 429
           ++L  ++   VS     +S+  K+F++L L
Sbjct: 95  SMLMMNLLAFVSAVLMGFSKLGKSFEMLIL 124


>BC034394-1|AAH34394.1|  322|Homo sapiens hypothetical protein
           MGC34821 protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = -1

Query: 680 GWISPHKALLMGEDTPSNAPVTETEVSWMASIMFIFAPI-AVFIYGIAADKFGRKNALLC 504
           GW+    + L    T  +       +  M   +F+   +    IYG  +D+ GRK     
Sbjct: 119 GWVYDRSSFLSTIVTEWDLVCESQSLKSMVQSLFMAGSLLGGLIYGHLSDRVGRKIICKL 178

Query: 503 CSIPIAVSIDDDSYSRCKTFKLLFLLLRWVDEFTAQQVL 387
           C + +A+S    +++   TF L++ +LR++  F+   +L
Sbjct: 179 CFLQLAISNTCAAFA--PTF-LVYCILRFLAGFSTMTIL 214


>AB208987-1|BAD92224.1|  517|Homo sapiens solute carrier family 2
           (facilitated glucose transporter), member 1 variant
           protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = -1

Query: 692 WYRQGWISPHKALLMGEDTPSNAPVTETEV-SWMASIMFIFAPIAVFIYGIAADKFGRKN 516
           +Y Q W+  H+    GE   S  P T T + S   +I  +   I  F  G+  ++FGR+N
Sbjct: 68  FYNQTWV--HR---YGE---SILPTTLTTLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRN 119

Query: 515 ALLCCSIPIAVSIDDDSYSRC-KTFKLLFL 429
           ++L  ++   VS     +S+  K+F++L L
Sbjct: 120 SMLMMNLLAFVSAVLMGFSKLGKSFEMLIL 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,863,448
Number of Sequences: 237096
Number of extensions: 2038393
Number of successful extensions: 5404
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5396
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)