Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5701
         (774 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc seven...    52   3e-07
Z73974-3|CAA98273.1|  329|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z73977-2|CAA98291.2|  349|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z73968-1|CAA98230.2|  349|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical ...    28   8.5  

>U00063-9|AAK18957.1|  333|Caenorhabditis elegans Yeast glc
           seven-like phosphatasesprotein 2 protein.
          Length = 333

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 26/40 (65%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +2

Query: 2   VDETLMCSFQILKPADKRKL---YSGLNMGRPNTPPRAQP 112
           VDETLMCSFQILKPADK+K      G+   RP TPPR  P
Sbjct: 284 VDETLMCSFQILKPADKKKYPYGAGGVGSNRPVTPPRNAP 323


>Z73974-3|CAA98273.1|  329|Caenorhabditis elegans Hypothetical
           protein F29F11.6 protein.
          Length = 329

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 21/31 (67%), Positives = 25/31 (80%), Gaps = 2/31 (6%)
 Frame = +2

Query: 2   VDETLMCSFQILKPADKRK--LYSGLNMGRP 88
           VDETLMCSFQILKP++K+    Y G+N GRP
Sbjct: 285 VDETLMCSFQILKPSEKKAKYQYQGMNSGRP 315


>Z73977-2|CAA98291.2|  349|Caenorhabditis elegans Hypothetical
           protein C05A2.1 protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 2   VDETLMCSFQILKP 43
           VDE L+CSFQILKP
Sbjct: 290 VDENLLCSFQILKP 303


>Z73968-1|CAA98230.2|  349|Caenorhabditis elegans Hypothetical
           protein C05A2.1 protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 2   VDETLMCSFQILKP 43
           VDE L+CSFQILKP
Sbjct: 290 VDENLLCSFQILKP 303


>AC090999-3|AAK26147.1|  536|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.7 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 482 SRQRIWATRFSLRNPECFF*NRKL*QPLFKCFSL 381
           +R + WA  F L NPE  F N  L  PLFK  +L
Sbjct: 265 NRGQCWACGFIL-NPEIVFGNIPLTHPLFKTLTL 297


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,631,290
Number of Sequences: 27780
Number of extensions: 384831
Number of successful extensions: 981
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)