Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5698
         (745 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.9  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   4.3  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   5.7  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   7.5  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   10.0 

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 649 LNSSGARYRLLFWGVNSLVGVCWFLLQYKHY 741
           LNS   +  ++F  V+ + GVC  L+ + H+
Sbjct: 518 LNSFKMKLSIIFGVVHMIFGVCMSLVNHNHF 548


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 658 MNSVKTGNKNTQGIPPYPMTDDSHDSISSETASVEFASF 542
           M+ VKT       IPP P  D+S    S  ++ + F  F
Sbjct: 119 MDQVKTDKPRELYIPPLPTEDESLIFGSGISSGINFDKF 157


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 737 CLYCSKNQHTPTNEFTPQNNKRYLAPDEFS 648
           C Y S+   T TN     NN    +P + S
Sbjct: 126 CKYASEGPSTGTNVINNNNNNSTTSPQDLS 155


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +3

Query: 525 FIPQLRKEANSTEAVSEEMESWLSSVIGYG 614
           +IP+  K       V  E   WL  +IG G
Sbjct: 47  WIPEATKAPEMMHTVDHESSFWLIFIIGVG 76


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 14/66 (21%), Positives = 27/66 (40%)
 Frame = -1

Query: 697 NSPPKIINGILRPMNSVKTGNKNTQGIPPYPMTDDSHDSISSETASVEFASFLS*GMNTV 518
           ++PP   N    PM      N ++     Y        S SS ++S   +S  S   ++ 
Sbjct: 73  HAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSP 132

Query: 517 GAPVAI 500
            +P+++
Sbjct: 133 DSPLSL 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,671
Number of Sequences: 2352
Number of extensions: 15380
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)