Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5690
         (524 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0UA19 Cluster: ATP/GTP-binding site motif A; n=10; Bur...    33   3.0  
UniRef50_A5K5H8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_A0AMD6 Cluster: Complete genome; n=1; Listeria welshime...    33   5.3  
UniRef50_Q4SZR1 Cluster: Chromosome undetermined SCAF11541, whol...    32   7.0  
UniRef50_Q8H0H1 Cluster: Putative uncharacterized protein A17; n...    32   9.3  

>UniRef50_A0UA19 Cluster: ATP/GTP-binding site motif A; n=10;
           Burkholderia|Rep: ATP/GTP-binding site motif A -
           Burkholderia cenocepacia MC0-3
          Length = 383

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
 Frame = -3

Query: 282 PQPDTVRDTLAYIPDRSRYNDLFRTLNPLKARNTSDASDSAVGYSDATTTLTSLPEIRNL 103
           PQ D V DT++ +PD +   +L R+  PL A       D AV           L E    
Sbjct: 10  PQTDRVADTMSVLPDDASVTELMRSFAPLLA-------DEAVTELVINRPQRILTETHRG 62

Query: 102 WHAHKLNK--YQRIKGIFCFFFSIFNLETNEE*P 7
           W AH L +  ++R+        ++ N   + E P
Sbjct: 63  WQAHDLPELDFERLMAFAVAIATLTNQSVSTEHP 96


>UniRef50_A5K5H8 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 932

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = -3

Query: 219 LFRTLNPLKARNTSDASDSAVGYSDATTTLTSLPEIRNLWHAHKLNK 79
           +FR +NP K  N  DA DSA G S   + + S P+  NL    K+NK
Sbjct: 164 IFRFVNPRK--NEGDAGDSARGPSCYNSHVVSSPQNYNLSEIKKMNK 208


>UniRef50_A0AMD6 Cluster: Complete genome; n=1; Listeria welshimeri
           serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
           welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
           /SLCC5334)
          Length = 42

 Score = 32.7 bits (71), Expect = 5.3
 Identities = 13/28 (46%), Positives = 22/28 (78%)
 Frame = -1

Query: 470 KFSVITILKLMRSRKPTNIFLKKTIIFD 387
           K S++  +KL++S+K TN+ LK+ II+D
Sbjct: 14  KRSILPYIKLLKSKKVTNLHLKERIIYD 41


>UniRef50_Q4SZR1 Cluster: Chromosome undetermined SCAF11541, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF11541, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 444

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 278 CGVSGELFWSFNSLIRIHFNS-XPDSKSICMY 370
           CGVSG ++  FN  + + F+S  P   S+C+Y
Sbjct: 202 CGVSGSVWVHFNHTVSVQFHSPWPGRNSLCLY 233


>UniRef50_Q8H0H1 Cluster: Putative uncharacterized protein A17; n=1;
           Nicotiana tabacum|Rep: Putative uncharacterized protein
           A17 - Nicotiana tabacum (Common tobacco)
          Length = 573

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 194 LSGFKVRNRSLYRDRSGMYANVSRTVSGCGVSGELFWSFNSLIRI 328
           +  FK    +L   RS  ++ V  T  GC ++  +FW FNS  R+
Sbjct: 381 MGDFKTGYLTLTSPRSMFFSQVIGTAMGCVITPLVFWIFNSAYRL 425


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,673,172
Number of Sequences: 1657284
Number of extensions: 7321526
Number of successful extensions: 17766
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17764
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)