Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5690
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   3.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   8.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   8.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.8  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 285 TPQPDTVRDTLAYIP 241
           TP+PD + + L ++P
Sbjct: 353 TPEPDCIHELLGHMP 367


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEV 433
           S  F DH+IE+ EV
Sbjct: 90  SAAFQDHNIEITEV 103


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEV 433
           S  F DH+IE+ EV
Sbjct: 323 SAAFQDHNIEITEV 336


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEV 433
           S  F DH+IE+ EV
Sbjct: 323 SAAFQDHNIEITEV 336


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 90  KLNKYQRIKGIFCFFFSIFNL 28
           + N YQ +      FF++FN+
Sbjct: 515 RFNNYQSLAHYLRVFFTVFNV 535


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEVKKTDK 418
           SKVFG+ +  + ++ K++K
Sbjct: 100 SKVFGNDEKALEQIAKSEK 118


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEVKKTDK 418
           SKVFG+ +  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 474 SKVFGDHDIEVNEVKKTDK 418
           SKVFG+ +  + ++ K++K
Sbjct: 160 SKVFGNDEKALEQIAKSEK 178


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 355 LRIRXAIKMDPY*T 314
           LR+R  IK+DP+ T
Sbjct: 175 LRLREEIKVDPFMT 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,664
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)