Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5687
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.       28   5.9  
AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA...    28   5.9  
AY113255-1|AAM29260.1|  283|Drosophila melanogaster AT14585p pro...    28   7.8  
AE014297-4190|AAF56755.2|  283|Drosophila melanogaster CG5017-PA...    28   7.8  

>AF129420-1|AAD29408.1| 1685|Drosophila melanogaster AXO protein.
          Length = 1685

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 321  FVPLYVQFHREINLKINYIESSANIVLID 235
            FV LY+  +REI    NY +   N+ L+D
Sbjct: 1366 FVHLYISLNREIVFLYNYGDEIVNLTLLD 1394


>AE014296-890|AAF47929.2| 1765|Drosophila melanogaster CG18296-PA
            protein.
          Length = 1765

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -2

Query: 321  FVPLYVQFHREINLKINYIESSANIVLID 235
            FV LY+  +REI    NY +   N+ L+D
Sbjct: 1370 FVHLYISLNREIVFLYNYGDEIVNLTLLD 1398


>AY113255-1|AAM29260.1|  283|Drosophila melanogaster AT14585p
           protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +1

Query: 373 KWYVDPNDIFIDTILT-TYLIN 435
           +++ DPND F +T+LT TY +N
Sbjct: 139 EFHFDPNDYFTNTVLTKTYFLN 160


>AE014297-4190|AAF56755.2|  283|Drosophila melanogaster CG5017-PA
           protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = +1

Query: 373 KWYVDPNDIFIDTILT-TYLIN 435
           +++ DPND F +T+LT TY +N
Sbjct: 139 EFHFDPNDYFTNTVLTKTYFLN 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,666,340
Number of Sequences: 53049
Number of extensions: 226936
Number of successful extensions: 336
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)