BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5686
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 56 2e-08
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 56 2e-08
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 52 4e-07
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 52 4e-07
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 52 4e-07
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 52 4e-07
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 32 0.41
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 32 0.41
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 32 0.41
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.41
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.41
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.41
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.41
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.72
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical p... 28 6.7
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 28 6.7
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 28 6.7
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 28 6.7
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 28 6.7
AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical ... 27 8.9
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 27 8.9
AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 27 8.9
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006672-8|AAY43997.1| 125|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ... 27 8.9
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 523 DGETAGMNEDGSFIGQY 573
D + EDGSFIGQY
Sbjct: 1107 DTDPGVFTEDGSFIGQY 1123
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 523 DGETAGMNEDGSFIGQY 573
D + EDGSFIGQY
Sbjct: 1291 DTDPGVFTEDGSFIGQY 1307
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 523 DGETAGMNEDGSFIGQYGRETTSANI-PASRTQ 618
D + EDGSFI G+ ++ PA R +
Sbjct: 1107 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPE 1139
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 523 DGETAGMNEDGSFIGQYGRETTSANI-PASRTQ 618
D + EDGSFI G+ ++ PA R +
Sbjct: 1291 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPE 1323
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1054 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1106
Query: 523 DGETAGMNEDGSFIGQYGRETTSANI-PASRTQ 618
D + EDGSFI G+ ++ PA R +
Sbjct: 1107 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPE 1139
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +1
Query: 343 RNRGGKYDVHDRELAHGRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEYG 522
R RG Y V RE GR P G +Y D+ + S++ G+K ES+TDSMA+YG
Sbjct: 1238 RQRGQNYPVSQREREQGRE--PILGKPDYK--TDDDEKRSLT-GSKA--ESETDSMAQYG 1290
Query: 523 DGETAGMNEDGSFIGQYGRETTSANI-PASRTQ 618
D + EDGSFI G+ ++ PA R +
Sbjct: 1291 DTDPGVFTEDGSFIAVSGQYVPQKSLMPAERPE 1323
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical protein
K07E12.1b protein.
Length = 12268
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +1
Query: 391 GRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEY--GDGETAGMNEDGSFI 564
G YP G E P DN + G TDS + GDG NE+G I
Sbjct: 10873 GNYIYPAVGSDEKILPTDNLGKVVYPITRPDGSPLATDSTGVFVTGDGTIVERNEEGKPI 10932
Query: 565 GQYGRETTSAN 597
G G+ T+ N
Sbjct: 10933 GPDGQVLTTDN 10943
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +1
Query: 391 GRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEY--GDGETAGMNEDGSFI 564
G YP G E P DN + G TDS + GDG NE+G I
Sbjct: 10918 GNYIYPAVGSDEKILPTDNLGKVVYPITRPDGSPLATDSTGVFVTGDGTIVERNEEGKPI 10977
Query: 565 GQYGRETTSAN 597
G G+ T+ N
Sbjct: 10978 GPDGQVLTTDN 10988
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +1
Query: 391 GRRDYPDAGFHEYTHPLDNKSRHSMSSGTKPGPESDTDSMAEY--GDGETAGMNEDGSFI 564
G YP G E P DN + G TDS + GDG NE+G I
Sbjct: 10918 GNYIYPAVGSDEKILPTDNLGKVVYPITRPDGSPLATDSTGVFVTGDGTIVERNEEGKPI 10977
Query: 565 GQYGRETTSAN 597
G G+ T+ N
Sbjct: 10978 GPDGQVLTTDN 10988
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V + C YQ AT+C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQCAPACQQS 91
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V + C YQ AT+C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQCAPACQQS 91
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V + C YQ AT+C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQCAPACQQS 91
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V + C YQ AT+C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQTSCSCAQPVQQLTYQVQATQCAPACQQS 91
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V + C YQ A++C PAC S
Sbjct: 39 PSCSCQQTTYAQPPQYSCSCQNTAPVQTSCSCAQPVQQQTYQVQASQCAPACQQS 93
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V C YQ A++C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQKSCSCAQPVQQQTYQIQASQCAPACQQS 91
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -1
Query: 182 PSCTVTLTSYSWPGSSPVRITKSSSVMSLVRCQSGCPLSRYQ--ATKCVPACPSS 24
PSC+ T+Y+ P ++ V C YQ A++C PAC S
Sbjct: 37 PSCSCQRTTYTQPQQYSCSCQNTAPVQKSCSCAQPVQQQTYQIQASQCAPACQQS 91
>Z79756-11|CAB02119.2| 614|Caenorhabditis elegans Hypothetical
protein F53C11.6 protein.
Length = 614
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Frame = +1
Query: 1 VIVRWIPSLDGHAGTHFVAWYRLKGHPDW-QRTNDITEDDFV-----ILTGLEPGQLYEV 162
V++RW + G + WY + P QR N++ DF+ ++TGL+ LYE
Sbjct: 408 VMLRWSAPIYVDEGKRY--WYTITYKPRTPQRRNNVVAVDFINKDRYLVTGLKSFTLYEF 465
Query: 163 KVTV 174
V V
Sbjct: 466 SVYV 469
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 61 YRLKGHPDWQR--TNDITEDDFVILTGLEPGQLYEVKVTVH----DGHYFSTSELRTVDT 222
+ L G +W +T ++ L+PG LY +KV + G + + E+RT +
Sbjct: 3181 FELVGLDEWNEGTREGVTPRQNTLIDQLQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGS 3240
Query: 223 SIDGP 237
+ P
Sbjct: 3241 ELGPP 3245
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 61 YRLKGHPDWQR--TNDITEDDFVILTGLEPGQLYEVKVTVH----DGHYFSTSELRTVDT 222
+ L G +W +T ++ L+PG LY +KV + G + + E+RT +
Sbjct: 3181 FELVGLDEWNEGTREGVTPRQNTLIDQLQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGS 3240
Query: 223 SIDGP 237
+ P
Sbjct: 3241 ELGPP 3245
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 61 YRLKGHPDWQR--TNDITEDDFVILTGLEPGQLYEVKVTVH----DGHYFSTSELRTVDT 222
+ L G +W +T ++ L+PG LY +KV + G + + E+RT +
Sbjct: 3181 FELVGLDEWNEGTREGVTPRQNTLIDQLQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGS 3240
Query: 223 SIDGP 237
+ P
Sbjct: 3241 ELGPP 3245
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +1
Query: 61 YRLKGHPDWQR--TNDITEDDFVILTGLEPGQLYEVKVTVH----DGHYFSTSELRTVDT 222
+ L G +W +T ++ L+PG LY +KV + G + + E+RT +
Sbjct: 3181 FELVGLDEWNEGTREGVTPRQNTLIDQLQPGSLYRIKVRAYTAEGPGPWSDSLEIRTTGS 3240
Query: 223 SIDGP 237
+ P
Sbjct: 3241 ELGPP 3245
>AF038612-2|AAB92044.1| 507|Caenorhabditis elegans Hypothetical
protein F13B6.2 protein.
Length = 507
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +1
Query: 466 SSGTKPG---PESDTDSMAEYGDGETAGMNEDGSFIGQYGRETTSANIPASRTQP 621
+SGT+ G P M + ++ GSF QY TT+ N+ A+ QP
Sbjct: 387 ASGTEQGSSFPSGLNGKMVASSSINSVEISSIGSFAIQYHLNTTTTNLEATTNQP 441
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 92 RCQSGCPLSRYQATKCVPAC 33
+CQS C + Q+ +C PAC
Sbjct: 204 QCQSSCVQQQQQSNQCEPAC 223
>AF016451-3|AAB66001.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 5
protein.
Length = 388
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 92 RCQSGCPLSRYQATKCVPAC 33
+CQS C + Q+ +C PAC
Sbjct: 204 QCQSSCVQQQQQSNQCEPAC 223
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 69 QGAPRLAADQRHHRGRLRDPDGAGARPAVRGQGHGARRPLLQHQRAADGRHLHRRTD--S 242
+GA R + ++HH D R H R +H+R D RH R++
Sbjct: 270 RGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRR--DDRHRSERSERSE 327
Query: 243 EAGREDRDR 269
+ R DR+R
Sbjct: 328 RSERSDRER 336
>AC006672-8|AAY43997.1| 125|Caenorhabditis elegans Hypothetical
protein K08D12.7 protein.
Length = 125
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +3
Query: 21 LARRTRGDALRG---LVPAQGAPRLAADQRHHRGRLRDPDGAGARPAVRGQGHGARR 182
L R+ R D G + PA G R+A+ P+GAGA+ V G+ +R
Sbjct: 25 LTRKRRADNSYGDEAVTPAGGGARVASMAVEEAPATVAPEGAGAQSNVESSGYRKKR 81
>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
protein C07H6.3 protein.
Length = 1378
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 167 TLTSYSWPGSSPVRITKSSSVM-SLVRCQSGCPLSRYQATKCVPA 36
T + S P S ++++S + S +R +G +SRY+++ C PA
Sbjct: 301 TPSPLSLPSPSGGQMSRSRDLTRSSLRAPAGISISRYRSSSCAPA 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.135 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,944,653
Number of Sequences: 27780
Number of extensions: 209238
Number of successful extensions: 1014
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
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