Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5685
(771 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.45
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 0.78
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 0.78
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 24 1.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 4.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.2
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 4.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 7.3
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 7.3
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 25.8 bits (54), Expect = 0.45
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -1
Query: 549 TVQNTEGTEVPPQTQRLQTIRENGIIDNPNGPPLYGVKWKK 427
TV G E+ P TQ + R N G P+ V W K
Sbjct: 303 TVTAPLGAEIEPSTQTIDFGRPATFTCNVRGNPIKTVSWLK 343
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.0 bits (52), Expect = 0.78
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 207 RLQGYSLELWRHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 55
+L+G + +D+GV ++ N+ ++V+F GD R +L+FR
Sbjct: 354 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.0 bits (52), Expect = 0.78
Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 207 RLQGYSLELWRHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 55
+L+G + +D+GV ++ N+ ++V+F GD R +L+FR
Sbjct: 444 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 436 FDSIQRRAVRIVDNPILTDRLEPLGL 513
+DSI+ R I D +T+ PLGL
Sbjct: 167 YDSIEARDSAIFDGDFITENNLPLGL 192
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 499 PNDP*EWDYRQSERPSSVWSQMEEAGIWEPRPRDGSS 389
P+D E + ++S++PS V + G E R R S
Sbjct: 349 PSDKEEREAQKSQKPSPVTGASKSHGDLELRQRSSKS 385
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 591 IISNKLLRALPMEHTVQNTEGTEVPPQTQRLQTIRENGIIDNPN 460
++ +K RA H NT+G + TQR Q +++ ++ P+
Sbjct: 151 LLEHKKRRARRDIHPELNTQGIALADLTQRAQIGQKHKLLIGPS 194
Score = 21.4 bits (43), Expect = 9.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 31 QERRSKLVSEVENSLGRVSEW 93
QER S+LV +EN V W
Sbjct: 465 QERESELVPYLENKGNGVYAW 485
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.6 bits (46), Expect = 4.2
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = -1
Query: 573 LRALPMEHTVQNTEGTEVPPQTQRLQTIRENGIIDNPNGPPLYGVK---WKKLVFGSPG 406
L A HT + G L I + +I N P YG+K + K F +PG
Sbjct: 16 LNATNSPHTCRTKNGDYTKIMPDILTAIGQTPLIKLNNIPKSYGIKCEIYAKCEFLNPG 74
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 566 HSPWNIRYKIQREPKSL 516
H PWN +QR K +
Sbjct: 462 HEPWNAPLNVQRAAKCI 478
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.2 bits (45), Expect = 5.5
Identities = 5/20 (25%), Positives = 12/20 (60%)
Frame = +2
Query: 278 KPSWRPKCWESSTERSGTSR 337
+P+W+ W+ ++ TS+
Sbjct: 419 EPAWKTHVWKKGRDKKSTSK 438
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 7.3
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -3
Query: 454 SSVWSQMEEAGIWEPRP--RDGSSTPREAGLVLYKAK 350
SS S EE W+P+P D V YK K
Sbjct: 375 SSSISSSEENDFWQPKPTLEDAPQNSLLPNFVGYKGK 411
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 651 TWSHCGHPQCVSRNLFL 701
TW+ CG P+ V+ + L
Sbjct: 522 TWTFCGTPEYVAPEVIL 538
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,121
Number of Sequences: 438
Number of extensions: 5811
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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