Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5684
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 40 0.002
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 40 0.002
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.005
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 36 0.020
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 35 0.061
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 35 0.061
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 32 0.43
U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical pr... 31 0.76
U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical pr... 31 0.76
AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein. 31 0.76
U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 2.3
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 2.3
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 7.0
U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 7.0
AF106583-5|AAD03136.1| 301|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Frame = +1
Query: 100 QESFKCPDDFGFYPHHISCDKYWKCDNG-VAELKTCGNGLAFDATDSKYLTENCDYLHNV 276
Q +F + G Y + C +C G + E +C + LAF+ LT CDY V
Sbjct: 1178 QSAFCDGKEDGLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQ-----LTGKCDYPQKV 1232
Query: 277 E-CGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 453
C Q + CS D N C+VF+ C G C G ++ VC
Sbjct: 1233 SGCENHGQ-----TNGECSEHGSFIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
Query: 454 MWADQVPECKNE 489
W VP C +
Sbjct: 1288 DWPSAVPSCSGQ 1299
Score = 44.8 bits (101), Expect = 6e-05
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Frame = +1
Query: 160 KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGER-TQLEPPISTP---H 324
KY +C NG A ++ CG L F+ T+ C Y V ECG + + P I+TP
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEA-----TQECTYRDEVPECGSQGSTSSPVITTPGQDQ 761
Query: 325 CSRLYGIFPDE----------NKC-------------DVFWNCWNGEASRYQCSPGLAYD 435
S YGI D+ ++C + C + AS +C L +D
Sbjct: 762 SSNYYGIPSDDVPSTTQTPVGDRCAYVASGLFDLGCSQKYIQCSDSAASVRECEGSLYFD 821
Query: 436 RESRVCMWADQVPECKNEEVANGFGCP 516
S+ C + D+V +C+ +V++ P
Sbjct: 822 ERSQSCRFRDEVFKCQTADVSSSSTVP 848
Score = 35.5 bits (78), Expect = 0.035
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 GIFPDENKCDVFWNCWNGEASRY-QCSPGLAYDRESRVCMWADQVPECKNEEVANG 504
G++ +E C C+ GE + C LA+++ + C + +V C+N NG
Sbjct: 1188 GLYRNERDCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNG 1243
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 503 DSAAQPPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGNRF 643
++ Q GE S GSF A+ +C +Y C+ G CP G F
Sbjct: 1236 ENHGQTNGECSEHGSFIADAN--NCEVFYRCVWGRKVVMTCPSGTVF 1280
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = +1
Query: 163 YWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEPPISTPHCSRLY 339
++ C G+A + C L F+ S +CD+ NV +C E++ E P +C +
Sbjct: 194 FFSCSEGIAHRRNCPANLVFNPAIS-----SCDWPKNVMDCSEKS--EKP---QNCGEVD 243
Query: 340 GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGF 507
G F F C NG C GL + ++++C + V EC E ++GF
Sbjct: 244 GYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLE--SSGF 297
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Frame = +1
Query: 115 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC--- 282
C + G++ + C NG+ + C +GL F + + CDY NV EC
Sbjct: 239 CGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKN-----QMCDYEWNVDECDLE 293
Query: 283 --GERTQLEPPISTPHCSRL-YGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 453
G + + C+ + G++ + V +C NG + ++C P L ++ S +C
Sbjct: 294 SSGFMENYKASEALTPCTNMDNGLYALDCTPRVL-SCQNGRENIFECPPSLVFNENSLIC 352
Query: 454 MWADQVPECKNEE 492
+ + +C E+
Sbjct: 353 DYPETSLKCCMED 365
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +1
Query: 373 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGF 507
F C +GEA C L Y + C W V EC E N F
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEF 86
Score = 30.7 bits (66), Expect = 1.00
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Frame = +1
Query: 115 CPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERT 294
CP+D ++ + CD W+ + V E G F S + + + GE +
Sbjct: 55 CPEDLVYHKNLEFCD--WR--HNVFECGEEGEENEFSGDGSGESSGDEEITFGDSSGESS 110
Query: 295 QLEPPISTPHCSRLY-GIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQV 471
E + C L G++ + C +G CS L YD ++ C W +
Sbjct: 111 GDE--LLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNKKCSWKGMI 168
Query: 472 PEC 480
EC
Sbjct: 169 DEC 171
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 306
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 307 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 483
P P C G F F C NG A C GL + + C + V EC+
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQ 360
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 373 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE-EVANGFG 510
++ C A C L YD +S+ C+W V ECK + + +G G
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG 201
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 319 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 480
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-ECGERTQLEP 306
G +P+ + + C G+A + C L F+ T L CD+ +V EC
Sbjct: 253 GIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPT---ILV--CDWPRDVAECAGL----- 302
Query: 307 PISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 483
P P C G F F C NG A C GL + + C + V EC+
Sbjct: 303 PTPQPTCEE-DGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQ 360
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 373 FWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNE-EVANGFG 510
++ C A C L YD +S+ C+W V ECK + + +G G
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSG 201
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +1
Query: 319 PHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 480
P C + GI P+ F C G A C L ++ VC W V EC
Sbjct: 245 PTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.035
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 15/123 (12%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTEN----CDYLHNVECGERTQ 297
GFYP+ +C + C + + +C +GL + A+ KY T + C T+
Sbjct: 487 GFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSAS-LKYCTTSTASGCSVTTTRAPTTTTK 545
Query: 298 LEPPISTP-----------HCSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRES 444
P ++T C++ G F + C F C NG + ++C GL++ ++
Sbjct: 546 SAPTVTTTTRAPTTTTPAFKCTK-DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADT 604
Query: 445 RVC 453
+C
Sbjct: 605 MMC 607
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 106 SFKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDA 228
+FKC D GF+ C K+ +C NG++ C NGL+F A
Sbjct: 563 AFKCTKD-GFFGVPSDCLKFIRCVNGISYNFECPNGLSFHA 602
Score = 29.9 bits (64), Expect(2) = 0.005
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 566 PEDCRKYYICLEGVAREYGCPIGNRF 643
P DC K+ C+ G++ + CP G F
Sbjct: 575 PSDCLKFIRCVNGISYNFECPNGLSF 600
Score = 27.5 bits (58), Expect(2) = 0.005
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 281 AERGHSLSPQSPL---LTVRDCTASSLMKTSATFSG--TAGTEKPPAISAAPDLPTTESP 445
+ + +S+S S L +++ CT S+ S T + T T+ P ++ PTT +P
Sbjct: 503 SSKSYSMSCPSGLQYSASLKYCTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTTTTP 562
Query: 446 ASAC 457
A C
Sbjct: 563 AFKC 566
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 36.3 bits (80), Expect = 0.020
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Frame = +1
Query: 115 CPDDFGFYPHHISCD-KYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGER 291
CPD G Y + C KY +C N V ++C GL FD ++ E H G+R
Sbjct: 43 CPDGDGLYA--VGCSSKYLQCVNNVEYEQSCPEGLYFDRLLAR--CERRSSNHLCATGDR 98
Query: 292 TQL---EPPISTPHCSRLYGIFP-DENKC-DVFWNCWNGEASRYQC 414
L + +S RL G + D+ C + ++ C NG + +C
Sbjct: 99 VTLNVRQKAVSINCVGRLSGDYALDKTVCNENYYQCANGISYMRKC 144
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 346 FPDENKCD-VFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPEC 480
F D KC FW C NG+ R C L Y + +C + + V +C
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 382 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECK 483
C G + C+PGL Y+ ++ +C + V CK
Sbjct: 909 CMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCK 942
Score = 30.3 bits (65), Expect = 1.3
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDY-LHNVECGERTQLE- 303
G+Y S Y+ C + +C N L F +E C + + EC T L+
Sbjct: 961 GYYSAGCS-SYYFSCIDEQIRKMSCPNSLKFSKE-----SEKCVFPIDAKECSIATTLDR 1014
Query: 304 --PPISTPHCS-RLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVP 474
P + + C+ R G+ + + C NG A C L Y+ +++ C +
Sbjct: 1015 TPPAVPSDFCTIRSNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNK 1074
Query: 475 ECKNEEV 495
+C N+ +
Sbjct: 1075 DCGNDYI 1081
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +1
Query: 136 YPHHISCDKY-WKCDNGVAELKTCGNGLAFDATDSKYLTEN-CDYLHNV-ECGERTQLEP 306
+ ++ C Y W+C NG KTC L + L +N CD+ +V +C E E
Sbjct: 211 FTDNVKCSPYFWQCSNGKLFRKTCPEKLIY------VLDQNLCDFPESVKDCPEYNGSET 264
Query: 307 PISTP 321
P
Sbjct: 265 SYRAP 269
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 379 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 495
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 367 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 486
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 282
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 379 NCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEV 495
NC NG+ + + C GL + E C ADQ+ EC V
Sbjct: 543 NCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 367 DVFWNCWNGEASRYQCSPGLAYDRESRVCMWADQVPECKN 486
D + C NG QC LA+D +C + VPEC N
Sbjct: 229 DHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPECTN 268
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNV-EC 282
GFY D Y C NG C LAFD +++ + CDY+ NV EC
Sbjct: 220 GFYSFGECSDHYTACSNGYLIPMQCPARLAFD--EARVI---CDYVMNVPEC 266
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.43
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 379 NCWNGEASRYQCSPGLAYDRESRVCMW 459
N + G R C+PG +D +S+VC+W
Sbjct: 299 NLFCGRWQRMPCAPGTVFDVQSQVCVW 325
>U41508-6|ABS19459.1| 323|Caenorhabditis elegans Hypothetical
protein W01C8.5b protein.
Length = 323
Score = 31.1 bits (67), Expect = 0.76
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 241 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 417
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 149 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 200
Query: 418 PGLAYDRESRVCMWADQVPECKNE 489
PGL +C+W + NE
Sbjct: 201 PGLIESNTGPLCIWMHNKDKAANE 224
>U41508-5|AAG00025.2| 511|Caenorhabditis elegans Hypothetical
protein W01C8.5a protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.76
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 241 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 417
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 418 PGLAYDRESRVCMWADQVPECKNE 489
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>AF326938-1|AAG49388.1| 511|Caenorhabditis elegans XG314 protein.
Length = 511
Score = 31.1 bits (67), Expect = 0.76
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 241 YLTENCDYLHNVECGERTQLEPPISTPHCSRLYGIFPDENKCDVFWNCWNGEASRYQC-S 417
YL N Y NVE G R ++ P + P LY I DEN F EA R S
Sbjct: 337 YLMRNVTYNFNVE-GGREKMIPELYNP----LY-IGDDEN--GGFSELSQNEAERVTIHS 388
Query: 418 PGLAYDRESRVCMWADQVPECKNE 489
PGL +C+W + NE
Sbjct: 389 PGLIESNTGPLCIWMHNKDKAANE 412
>U29157-1|AAA68423.4| 675|Caenorhabditis elegans Hypothetical
protein C34D10.2 protein.
Length = 675
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 569 EDCRK-YYICLEGVAREYGCPIGNRFQDRRRPTAL 670
E CRK +C +G Y CP + +DRRRP AL
Sbjct: 203 EQCRKPARLCRQG----YACPFYHNSKDRRRPPAL 233
>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
protein B0365.1 protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 299 LSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESP 445
L P + T T L+ TAGTE+PPA S AP+ T E P
Sbjct: 433 LKPMPTVPTAPQTTGQFLLSPERN---TAGTERPPA-SPAPNTSTIEHP 477
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = +1
Query: 325 CSRLYGIFPDENKCDVFWNCWNGEASRYQCSPGLAYDRESRVC 453
C + D + CD +C GEA Y C+ Y + R C
Sbjct: 1236 CVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSC 1278
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/61 (34%), Positives = 26/61 (42%)
Frame = -2
Query: 456 HADAGLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQSRTVRSGDWGLKLCPLSAL 277
H AG S + S LIA G +P N + + A Q R SGD L + LS
Sbjct: 66 HGSAGPSPISHSQPCLIASGSRSSDIPPNESK--MSTSAYQRRASASGDQALDVPTLSQT 123
Query: 276 N 274
N
Sbjct: 124 N 124
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 145 HISCDKYWKCDNGVAELKTCGNGLAFDAT 231
H +K+WKC+ G + TC +DAT
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDAT 57
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 130 GFYPHHISCDKYWKCDNGVAELKTCGNGLAFD 225
G+ P +C +++C +G+ ++CG G +D
Sbjct: 164 GYKPDVYNCKNFYQCASGLWTQRSCGEGTIWD 195
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +1
Query: 154 CDKYWKCDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVECGERTQLEPPISTPHCSR 333
CD+ KC NGV TC G D Y + C+ + C + + I + C+
Sbjct: 376 CDQNAKCSNGVC---TCSEGFTGDGFRC-YDVDECE-IPGAVCRDHSICSNTIGSFECTC 430
Query: 334 LYGIFPDENKCDVFWNC 384
G ++ KC+ C
Sbjct: 431 HGGYRFEDGKCEDVDEC 447
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 361 KCDVFWNCWNGEASRYQCSPGLAYDRESRVC 453
+CDV C+NG Y C G +++ R+C
Sbjct: 1593 QCDVSKFCFNGTNDNYICQNGGRCNKDLRLC 1623
>U41992-3|AAL02507.1| 134|Caenorhabditis elegans Hypothetical
protein F32E10.8 protein.
Length = 134
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +1
Query: 109 FKCPDDFGFYPHHISCDKYWKCDNGVAELKTCGNGLAFDATDSKY 243
F+C D + CDKY C +G E + C L T Y
Sbjct: 90 FRCTDSSSCIAPNRVCDKYKDCRDGSDERENCNQPLGTPNTTVIY 134
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 7/48 (14%)
Frame = +1
Query: 184 VAELKTCGNGLAFDATDSKYLTEN-----CDYLHNVE--CGERTQLEP 306
+ E +TCG+ ++F A KYL++ D + +++ C E ++++P
Sbjct: 69 IIECRTCGHSISFHAEPLKYLSQEDLDTYTDQISDLQTCCSELSEIDP 116
>AF106583-5|AAD03136.1| 301|Caenorhabditis elegans Hypothetical
protein F23C8.8 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 531 SPTLARSAVTLIPKIAVNITSVSRALPASTVAPSGTVFKI 650
+PTL+ S LIP I ++++ P +T A S VFK+
Sbjct: 3 TPTLSPSTEKLIPIIGLSVSGTFSPRPIATTAHS-VVFKV 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,229
Number of Sequences: 27780
Number of extensions: 369491
Number of successful extensions: 1457
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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