Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5683
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70852-6|AAK29814.1|  226|Caenorhabditis elegans Pur alpha like ...    56   2e-08
Z78542-4|CAB01747.1|  192|Caenorhabditis elegans Hypothetical pr...    42   6e-04
Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U41017-7|AAY86315.1|  251|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF040661-9|AAG24214.1|  345|Caenorhabditis elegans Hypothetical ...    28   6.1  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U70852-6|AAK29814.1|  226|Caenorhabditis elegans Pur alpha like
           protein protein 1 protein.
          Length = 226

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 32/101 (31%), Positives = 51/101 (50%)
 Frame = +3

Query: 312 DSGQQPQEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLAMSTAAEF 491
           + G +  E  LAT  L +Q KR+Y+DV +N RGR+IK+AE+G +  +S+I L++  A   
Sbjct: 7   ERGTKRAEDSLATHQLTVQYKRYYIDVNENTRGRYIKIAELGTN-YKSRIILSIVAAKAI 65

Query: 492 RDHLSSFSDFYSSLGXXXXXXXXXXGKLKSEMMLKDNRRYY 614
              +S                      +KSE +  D R++Y
Sbjct: 66  VSEISKMLALIDE-PSTGEHAPKESSLIKSETLNVDGRKFY 105



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
 Frame = +3

Query: 327 PQEQELA-TKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGR--RSQIFLAMSTAAEFRD 497
           P+E  L  ++ L +  ++FY+D+K+N RGRF+++A++  + R  R QI +     AE   
Sbjct: 86  PKESSLIKSETLNVDGRKFYVDLKENVRGRFLRIAQMPMNPRQTRQQIAIPSDGIAEIHK 145

Query: 498 HLSSF 512
            L+ +
Sbjct: 146 VLTEY 150



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
 Frame = +1

Query: 616 LDLKENSRGRFLRVSQ-TITRGGPRSQIALPAQGMIEFRGPLTD 744
           +DLKEN RGRFLR++Q  +     R QIA+P+ G+ E    LT+
Sbjct: 106 VDLKENVRGRFLRIAQMPMNPRQTRQQIAIPSDGIAEIHKVLTE 149



 Score = 33.1 bits (72), Expect = 0.21
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 628 ENSRGRFLRVSQTITRGGPRSQIALPAQGMIEFRGPL 738
           +N RG F+R+S+     G R+ I +P   +++FR  L
Sbjct: 181 KNDRGEFVRISEIKLNSGYRNAITVPMSALVDFRKEL 217


>Z78542-4|CAB01747.1|  192|Caenorhabditis elegans Hypothetical
           protein F20D1.4 protein.
          Length = 192

 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +1

Query: 616 LDLKENSRGRFLRVSQTITRGGPRSQIALPAQGMIEFRGPLTD 744
           +DLKEN RGRFLR++    R   R QIA+P+ G+ E    LT+
Sbjct: 46  VDLKENDRGRFLRIAPMNPR-QTRQQIAIPSDGIAEIHKVLTE 87



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = +3

Query: 351 KMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQIFLAMSTAAEFRDHLSSF 512
           K L    ++FY+D+K+N RGRF+++A +     R QI +     AE    L+ +
Sbjct: 35  KALSSNQRKFYVDLKENDRGRFLRIAPMNPRQTRQQIAIPSDGIAEIHKVLTEY 88


>Z69788-1|CAA93646.1|  894|Caenorhabditis elegans Hypothetical protein
            F09A5.2 protein.
          Length = 894

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +3

Query: 282  QGMDAGGNNFDSGQQPQEQELATKMLQIQSKRFYLDVKQNRRGRFIKVAEIGADGRRSQI 461
            Q MD  G+ +DSG +   Q    ++ Q+ ++RF  + K+  +  F ++      G+R Q 
Sbjct: 827  QDMDEDGD-YDSGSEGHSQGTCAQLDQVLTERFGEEQKKEIKQIFCEITSKSMRGKRRQS 885

Query: 462  FLAMST 479
               +ST
Sbjct: 886  NSTVST 891


>U41017-7|AAY86315.1|  251|Caenorhabditis elegans Hypothetical
           protein T26C11.8 protein.
          Length = 251

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
 Frame = -1

Query: 515 TETGQVVTELGSC*HGEEYLTASPVRSNFGYFNESTPPVLLYVQVEAFXXXXXXXXXXXX 336
           T TG V+        G   L  + V   FG FN  + P+++ V +E F            
Sbjct: 125 TITGAVIAVYRHA-FGAALLVLTQVVMCFGVFNLFSKPMII-VTLEKFGSEENFLESQFL 182

Query: 335 XXXXLTGVKIVPSRVHALTMIFHIWLHYCNFYLQ---DIFLMAQTNQRLSSSKQILP 174
                  V      V+ L  +  IW  YC  Y +   +I   +Q N   SSS +  P
Sbjct: 183 LGFYNCLVTFACCLVYFLPTVLGIWFMYCTIYEEQDANIVTSSQANVSTSSSDRSTP 239


>AF040661-9|AAG24214.1|  345|Caenorhabditis elegans Hypothetical
           protein W10G11.5 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 442 TGDAVKYSSPCQQLPSSVTTCPVSVIFTRRSDHLT-RTTFP 561
           T  ++  + P  QLP++VTT P+    TR++   T R T P
Sbjct: 123 TTTSIPTTVPSTQLPTTVTTTPIPTTTTRKTTTTTLRPTKP 163


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 624 ERELPRAVPPCLPDHNTRGAPQSDRAAGSGHDRVSGPTD 740
           E E+P   PP          P+++ A GSG DR+S P D
Sbjct: 513 EDEIP---PPVDAFKKPEPRPETNVAGGSGEDRISEPVD 548


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,621,309
Number of Sequences: 27780
Number of extensions: 378391
Number of successful extensions: 994
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)