Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5679
         (434 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.56 
BC029439-1|AAH29439.1|  154|Homo sapiens ZMYM6 protein protein.        29   6.9  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 32.7 bits (71), Expect = 0.56
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 374 KKKKKNSRGGPVPNS 418
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>BC029439-1|AAH29439.1|  154|Homo sapiens ZMYM6 protein protein.
          Length = 154

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  YFLLLLPGKFLASTFTVCRNNRRKSIRQFRES 136
           + LLL  G+ LA T  V R  R+K++  F+ES
Sbjct: 121 FLLLLNVGQLLAQTKKVVRPTRKKTLSTFKES 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,888,651
Number of Sequences: 237096
Number of extensions: 924395
Number of successful extensions: 1217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)