Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5672
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   2.0  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   4.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    22   8.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 90  GPKAFPVSPGQVGEQRLSQEGWDL 19
           G K F   PG++GE+ L  E  D+
Sbjct: 421 GEKGFKGEPGRIGERGLMGEKGDM 444


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 234 YFCSPFTLLFAYCYS*RKYTWKND 305
           +F +  T + + CY+   Y W ND
Sbjct: 362 FFIAHLTAMSSTCYNPFLYAWLND 385


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 99  FTGGPKAFPV 70
           FTG P AFPV
Sbjct: 187 FTGAPAAFPV 196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,278
Number of Sequences: 2352
Number of extensions: 6332
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)