Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5668
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.6  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   4.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.9  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   7.8  

>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -3

Query: 566 KLPFSGVHAYFLVVL 522
           KLPF+G+H++ ++ L
Sbjct: 251 KLPFAGLHSHTIIYL 265


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 366 LSNTTAIAEAWARLDHKFD 422
           L+NT  +   W  LD+ FD
Sbjct: 32  LTNTLNVIHKWKYLDYDFD 50


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 640 INLFPFGRGHVDCSSSRFSIH 578
           ++  PFG G  +C  +RF+++
Sbjct: 432 MHYLPFGDGPRNCIGARFAVY 452


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 183 MLYRGDVVPKDVNAAIAT 236
           M+Y G  V  D+NA IAT
Sbjct: 319 MMYLGTPVMPDLNALIAT 336


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 490 ENSPSSIPSPTYQCTNARLAYIKSNLWSN 404
           E   ++I   TYQC   + A+ + NL+ +
Sbjct: 51  ETPLTNIEEKTYQCLLCQKAFDQKNLYQS 79


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = +2

Query: 236 HQNQENHPVRGLVPNWFQGGHQL-PT 310
           H   + HP RG  P+   G H + PT
Sbjct: 321 HHPSQYHPHRGSSPHHQHGNHTMGPT 346


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 616 GHVDCSSSRF 587
           GH++C SS+F
Sbjct: 63  GHINCDSSKF 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,892
Number of Sequences: 438
Number of extensions: 4076
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)