Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5665
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.00 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.00 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   4.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   4.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   4.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.0  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    21   7.0  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 315 FPLSMPSIQPYRNDCYVW 262
           F LS+ +I+PY N+ Y+W
Sbjct: 132 FQLSLKNIEPY-NNYYIW 148


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 1.00
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 315 FPLSMPSIQPYRNDCYVW 262
           F LS+ +I+PY N+ Y+W
Sbjct: 132 FQLSLKNIEPY-NNYYIW 148


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 326 ETLFFRFQCPVSS---HTVMIATSGSHPSYSRFLRLPY 222
           +T  F +  P++S    T+M +   + P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -3

Query: 326 ETLFFRFQCPVSS---HTVMIATSGSHPSYSRFLRLPY 222
           +T  F +  P++S    T+M +   + P  +RF  LPY
Sbjct: 283 KTAEFDWNKPINSGFYSTIMYSNGVTFPQRNRFSSLPY 320


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = +3

Query: 393 GTNPIALAAPAKNGDNLVVDLATTAVAMGKVEIQVHKEEPLPAGWALGPDGKTTTDAKLA 572
           GT      +PA    +L   L+  AVA   V        P P G +    G + + +  A
Sbjct: 25  GTIQACTTSPATA--SLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAA 82

Query: 573 FETAKLLP 596
             T+ + P
Sbjct: 83  RTTSSMYP 90


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -2

Query: 198 RQ*HLKRRNRPPERSQPTLSISPALHKDLLLLTGYRLYRIPIC 70
           R+ H K R    +  +     S  LH+ + + TG R ++  +C
Sbjct: 139 RRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVC 181


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 129 PVILKESAATALVDGCDALGATVGNFCMDVAI 224
           P  + ++   ALV G   +G  +GN  + VA+
Sbjct: 35  PYTVTQAILIALVLGSIIVGTVIGNILVCVAV 66


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 218 RDKEGAGSGSR 250
           +DK+ AGSGSR
Sbjct: 582 KDKKNAGSGSR 592


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +2

Query: 119 LCKAGDIERVGCDRSGGRLRRFRCYCRKLLYGCRD 223
           LC    ++R   D+   R   +RC   + +Y  R+
Sbjct: 15  LCSKASLKRHVADKHAERQEEYRCVICERVYCSRN 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,035
Number of Sequences: 438
Number of extensions: 2925
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)