Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5661
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81082-4|CAB03096.1| 176|Caenorhabditis elegans Hypothetical pr... 123 2e-29
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 123 2e-29
U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical pr... 35 0.010
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 35 0.013
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 35 0.013
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 35 0.013
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 35 0.013
Z72503-2|CAA96598.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.039
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 33 0.052
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 33 0.052
U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical pr... 31 0.21
U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 29 0.64
U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily ass... 29 0.64
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 29 0.85
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 29 0.85
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 29 0.85
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 28 1.1
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 28 1.1
AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical ... 28 1.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 28 1.1
AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical ... 28 1.5
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 27 2.0
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 27 2.0
AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical ... 27 2.0
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 3.4
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 3.4
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 3.4
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 3.4
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 3.4
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 27 3.4
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 27 3.4
Z81500-4|CAB04097.1| 254|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 26 4.5
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 26 4.5
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 26 4.5
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 26 6.0
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 25 7.9
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 25 7.9
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 25 7.9
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 25 7.9
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 25 7.9
>Z81082-4|CAB03096.1| 176|Caenorhabditis elegans Hypothetical
protein F42G4.3b protein.
Length = 176
Score = 123 bits (297), Expect = 2e-29
Identities = 47/77 (61%), Positives = 66/77 (85%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDD 226
KFAPRC +C PI+P+ G++E+V VVA+D+SFHV CY+CEDCG+ LSS EG+GCYP+D+
Sbjct: 99 KFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEGQGCYPIDN 158
Query: 227 HILCKTCNARRVRLLTN 277
H+LCKTCN R+R++++
Sbjct: 159 HLLCKTCNGNRLRVVSS 175
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 128 LDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCKTC 247
+++ FHV C++C C L+ G Y +DD C+ C
Sbjct: 1 MNQIFHVDCFKCGQCSKTLA----GASFYNIDDKPTCEGC 36
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 123 bits (297), Expect = 2e-29
Identities = 47/77 (61%), Positives = 66/77 (85%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDD 226
KFAPRC +C PI+P+ G++E+V VVA+D+SFHV CY+CEDCG+ LSS EG+GCYP+D+
Sbjct: 526 KFAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEGQGCYPIDN 585
Query: 227 HILCKTCNARRVRLLTN 277
H+LCKTCN R+R++++
Sbjct: 586 HLLCKTCNGNRLRVVSS 602
Score = 33.1 bits (72), Expect = 0.039
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 125 ALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCKTC 247
A+++ FHV C++C C L+ G Y +DD C+ C
Sbjct: 427 AMNQIFHVDCFKCGQCSKTLA----GASFYNIDDKPTCEGC 463
>U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical
protein ZK381.5a protein.
Length = 555
Score = 35.1 bits (77), Expect = 0.010
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +2
Query: 14 TKCIVLMTSITKFAPRCCVCELPIMPKKGQEETVTVVAL--DRSFHVKCYRCEDCGLLL 184
T+C L + + ++AP CE PK+ +E ++V+A + +H C+RC+ C +LL
Sbjct: 132 TEC--LGSGVVQYAPFDTKCEK--CPKRLEEGEISVMAARTGKRYHPSCFRCQTCDVLL 186
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 44 TKFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLD 223
T +AP C C ++ GQ V + + S+H+ C+ C++C + L+S + Y
Sbjct: 75 TLYAPVCAKCNEFVI---GQ----VVHSSNNSYHLACFTCDECNVHLNS----QIAYRYQ 123
Query: 224 DHILCKTCNARRVRL 268
ILC CN ++ ++
Sbjct: 124 GTILCFLCNQKKPKM 138
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 RCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILC 238
RC C + G+ + V +L+ +H+ C++C C L S A G D + C
Sbjct: 799 RCAHCNEEL----GRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGADVRVRDGRLHC 854
Query: 239 KTCNAR-RVRL 268
+TC + RV+L
Sbjct: 855 QTCYSNDRVQL 865
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform a protein.
Length = 1004
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 RCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILC 238
RC C + G+ + V +L+ +H+ C++C C L S A G D + C
Sbjct: 935 RCAHCNEEL----GRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGADVRVRDGRLHC 990
Query: 239 KTCNAR-RVRL 268
+TC + RV+L
Sbjct: 991 QTCYSNDRVQL 1001
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform c protein.
Length = 1099
Score = 34.7 bits (76), Expect = 0.013
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 RCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILC 238
RC C + G+ + V +L+ +H+ C++C C L S A G D + C
Sbjct: 1030 RCAHCNEEL----GRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGADVRVRDGRLHC 1085
Query: 239 KTCNAR-RVRL 268
+TC + RV+L
Sbjct: 1086 QTCYSNDRVQL 1096
>Z72503-2|CAA96598.1| 136|Caenorhabditis elegans Hypothetical
protein C26C6.6 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.039
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 56 PRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
P C C LP++ ++G +VA +R FH+ C+RC C
Sbjct: 74 PSCTGCSLPVI-ERG------LVAFNRLFHIDCFRCAIC 105
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 32.7 bits (71), Expect = 0.052
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +2
Query: 62 CCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCK 241
C C PI+ + L + +H C RC DC +S C+ D ILCK
Sbjct: 68 CAACAQPILDR------YVFTVLGKCWHQSCLRCCDCRAPMS-----MTCFSRDGLILCK 116
Query: 242 TCNARR 259
T +RR
Sbjct: 117 TDFSRR 122
Score = 31.9 bits (69), Expect = 0.091
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS 190
+++ RC C+ K ++E + A D+ FH++C++C C LL +
Sbjct: 122 RYSQRCAGCD-----GKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDT 164
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.052
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +2
Query: 62 CCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCK 241
C C PI+ + L + +H C RC DC +S C+ D ILCK
Sbjct: 45 CAACAQPILDR------YVFTVLGKCWHQSCLRCCDCRAPMS-----MTCFSRDGLILCK 93
Query: 242 TCNARR 259
T +RR
Sbjct: 94 TDFSRR 99
Score = 31.9 bits (69), Expect = 0.091
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS 190
+++ RC C+ K ++E + A D+ FH++C++C C LL +
Sbjct: 99 RYSQRCAGCD-----GKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDT 141
>U52003-8|AAM97990.1| 441|Caenorhabditis elegans Hypothetical
protein ZK381.5b protein.
Length = 441
Score = 30.7 bits (66), Expect = 0.21
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 89 PKKGQEETVTVVAL--DRSFHVKCYRCEDCGLLL 184
PK+ +E ++V+A + +H C+RC+ C +LL
Sbjct: 39 PKRLEEGEISVMAARTGKRYHPSCFRCQTCDVLL 72
>U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform a protein.
Length = 256
Score = 29.1 bits (62), Expect = 0.64
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
+F+P+C C I + V ++++FH++C+ C +C
Sbjct: 73 QFSPKCQGCHRAITDR-------CVSVMNKNFHIECFTCAEC 107
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 62 CCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCG 175
C C PI+ GQ V+AL + +H + Y C +CG
Sbjct: 19 CAACGKPII---GQ----VVIALGKMWHPEHYTCCECG 49
>U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform b protein.
Length = 256
Score = 29.1 bits (62), Expect = 0.64
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
+F+P+C C I + V ++++FH++C+ C +C
Sbjct: 143 QFSPKCQGCHRAITDR-------CVSVMNKNFHIECFTCAEC 177
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 62 CCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCG 175
C C PI+ GQ V+AL + +H + Y C +CG
Sbjct: 89 CAACGKPII---GQ----VVIALGKMWHPEHYTCCECG 119
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 28.7 bits (61), Expect = 0.85
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 125 ALDRSFHVKCYRCEDCG 175
A D+ FH+ C++C+ CG
Sbjct: 33 ANDKYFHINCFQCKKCG 49
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 119 VVALDRSFHVKCYRCEDCGLLL 184
++AL S+HV C++C +C +L
Sbjct: 144 LLALGLSWHVYCFKCSECSAVL 165
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/71 (32%), Positives = 26/71 (36%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDD 226
KF +C CE I K Q A FH C RC CG S +G Y D
Sbjct: 185 KFGVKCYECEKFIAGKVLQ-------AGGYKFHPTCARCSRCG---SHFGDGEEMYMQGD 234
Query: 227 HILCKTCNARR 259
I +C R
Sbjct: 235 EIWHPSCEHAR 245
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 28.7 bits (61), Expect = 0.85
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 125 ALDRSFHVKCYRCEDCG 175
A D+ FH+ C++C+ CG
Sbjct: 19 ANDKYFHINCFQCKKCG 35
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 119 VVALDRSFHVKCYRCEDCGLLL 184
++AL S+HV C++C +C +L
Sbjct: 130 LLALGLSWHVYCFKCSECSAVL 151
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/71 (32%), Positives = 26/71 (36%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDD 226
KF +C CE I K Q A FH C RC CG S +G Y D
Sbjct: 171 KFGVKCYECEKFIAGKVLQ-------AGGYKFHPTCARCSRCG---SHFGDGEEMYMQGD 220
Query: 227 HILCKTCNARR 259
I +C R
Sbjct: 221 EIWHPSCEHAR 231
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 28.7 bits (61), Expect = 0.85
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 125 ALDRSFHVKCYRCEDCG 175
A D+ FH+ C++C+ CG
Sbjct: 33 ANDKYFHINCFQCKKCG 49
Score = 28.3 bits (60), Expect = 1.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 119 VVALDRSFHVKCYRCEDCGLLL 184
++AL S+HV C++C +C +L
Sbjct: 144 LLALGLSWHVYCFKCSECSAVL 165
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/71 (32%), Positives = 26/71 (36%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDD 226
KF +C CE I K Q A FH C RC CG S +G Y D
Sbjct: 185 KFGVKCYECEKFIAGKVLQ-------AGGYKFHPTCARCSRCG---SHFGDGEEMYMQGD 234
Query: 227 HILCKTCNARR 259
I +C R
Sbjct: 235 EIWHPSCEHAR 245
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 62 CCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLS 187
CC+C+ + P + V+A +H++C++C C L+
Sbjct: 192 CCICDKVVYPVE------KVLANKNLYHIQCFKCCKCAKKLT 227
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 59 RCC-VCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLS 187
+CC CE+P+ E + + A + FH C+ C CG+ L+
Sbjct: 169 KCCRKCEIPL-----NREDMVMKAKEMIFHHACFVCFICGIKLN 207
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 59 RCC-VCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDCGLLLS 187
+CC CE+P+ E + + A + FH C+ C CG+ L+
Sbjct: 169 KCCRKCEIPL-----NREDMVMKAKEMIFHHACFVCFICGIKLN 207
>AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical
protein Y1A5A.1 protein.
Length = 192
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
K+ P+C C ++ ++ALDR +H +C+ C C
Sbjct: 120 KYNPKCAGCMETLVD-------TCLLALDRHWHPRCFTCSSC 154
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 80 PIMPKKGQEETVTVVALDRSFHVKCYRCEDCG 175
P + K + +TV ++ +DR F +C+ C++ G
Sbjct: 552 PPIAKADERKTVKLIQVDRRFKGQCHYCKNVG 583
>AF043693-1|AAB97536.1| 131|Caenorhabditis elegans Hypothetical
protein C34B2.4 protein.
Length = 131
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +2
Query: 107 ETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCKTCNARRVR 265
E ++A + +HV C+ C ++ +G C P + ILC C+ + R
Sbjct: 13 EESAILANGKVWHVNHLLCDLCKCRIN---DGERCVPQNGVILCSECHIKTTR 62
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 128 LDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCK 241
++ S+H C RC C L LSS + C+ +I C+
Sbjct: 35 MEDSYHESCLRCSCCQLSLSS---FKKCFSRHGNIYCE 69
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 27.5 bits (58), Expect = 2.0
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 128 LDRSFHVKCYRCEDCGLLLS 187
LD+ +H +C++C CG+ L+
Sbjct: 23 LDKVWHKQCFKCTVCGMTLN 42
>AF039720-7|AAB96695.1| 131|Caenorhabditis elegans Hypothetical
protein F33D11.1 protein.
Length = 131
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 92 KKGQEETVTVVALDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCKTCNARRVR 265
K G+E + + + +HV C+ C ++ +G C P + ILC C+ + R
Sbjct: 10 KVGEESAI--LTNGKVWHVNHLLCDLCNCRIN---DGERCVPQNGVILCSECHIKTTR 62
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 627 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 662
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 1367 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 1402
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 714 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 749
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 588 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 623
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 627 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 662
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 1367 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 1402
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 714 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 749
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 50 FAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
F +C C PI + G V AL +FH C+ C C
Sbjct: 588 FTTKCVSCRYPI--EAGDR---WVEALGNAFHSNCFTCARC 623
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
KF +C C I+P + V A + +HV+C++C C
Sbjct: 102 KFGTKCSSCNEGIVP-----DHVVRKASNHVYHVECFQCFIC 138
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 47 KFAPRCCVCELPIMPKKGQEETVTVVALDRSFHVKCYRCEDC 172
KF +C C I+P + V A + +HV+C++C C
Sbjct: 102 KFGTKCSSCNEGIVP-----DHVVRKASNHVYHVECFQCFIC 138
>Z81500-4|CAB04097.1| 254|Caenorhabditis elegans Hypothetical
protein F11D11.5 protein.
Length = 254
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 292 VCSHNISQKTNATCIASFAKYMIVKWITTST 200
VCSH ++ +ATC AS Y +K+ TST
Sbjct: 64 VCSHYYTELPDATCPAS---YKEIKFSVTST 91
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 92 KKGQEETVTVVALDRS--FHVKCYRCEDCGLLLS 187
KKG T V L FHV+C+ C CG LS
Sbjct: 85 KKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLS 118
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 92 KKGQEETVTVVALDRS--FHVKCYRCEDCGLLLS 187
KKG T V L FHV+C+ C CG LS
Sbjct: 93 KKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLS 126
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 92 KKGQEETVTVVALDRS--FHVKCYRCEDCGLLLS 187
KKG T V L FHV+C+ C CG LS
Sbjct: 85 KKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLS 118
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 92 KKGQEETVTVVALDRS--FHVKCYRCEDCGLLLS 187
KKG T V L FHV+C+ C CG LS
Sbjct: 93 KKGVSPTDMVYKLKAGLVFHVECHCCSLCGRHLS 126
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = +2
Query: 128 LDRSFHVKCYRCEDCGLLLSS*AEGRGCYPLDDHILCKTCNAR 256
L SF + +C+ CG + + + + D+ CK C R
Sbjct: 392 LSLSFCERYEKCKKCGFIHRKDSYSKTVHKCHDNAFCKICRQR 434
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 25.4 bits (53), Expect = 7.9
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 140 FHVKCYRCEDC 172
+HV C+RC DC
Sbjct: 528 YHVNCFRCIDC 538
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
ZK593.4 protein.
Length = 1477
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 65 CVCELPIMPKKGQEETVTVVALDRSFHVKCYRCE 166
C C L E T+T + D FHV+C CE
Sbjct: 1206 CSC-LGFNKSDDSESTLTCIMCDSEFHVRC--CE 1236
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 25.4 bits (53), Expect = 7.9
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +2
Query: 74 ELPIMPKKGQEETVTVVALDRS 139
++P++P+KG ++T T + R+
Sbjct: 1051 KMPVVPRKGSDKTATFTMMSRN 1072
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 137 SFHVKCYRCEDCGLLL 184
++H C+RCE C LL
Sbjct: 296 TYHPNCFRCETCRQLL 311
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger
protein protein.
Length = 839
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 47 KFAPRCCVC--ELPIMPKKGQEETVTVVALDRSFHVKC 154
KF C +C E P KKG + RSFHV C
Sbjct: 122 KFNKLCYICNEERPNDAKKGACMSCNKSTCKRSFHVTC 159
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger
protein protein 1,isoform a protein.
Length = 867
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +2
Query: 47 KFAPRCCVC--ELPIMPKKGQEETVTVVALDRSFHVKC 154
KF C +C E P KKG + RSFHV C
Sbjct: 122 KFNKLCYICNEERPNDAKKGACMSCNKSTCKRSFHVTC 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,817,554
Number of Sequences: 27780
Number of extensions: 126600
Number of successful extensions: 371
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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