Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5660
         (721 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022481-1|AAY54897.1|  163|Drosophila melanogaster IP06044p pro...    31   2.1  
AE013599-2368|AAF57937.2|  163|Drosophila melanogaster CG6435-PA...    31   2.1  
AY070977-1|AAL48599.1|  308|Drosophila melanogaster RE07468p pro...    29   6.4  
AF195189-1|AAF27818.1|  229|Drosophila melanogaster yippee inter...    29   6.4  
AF145313-1|AAF08394.1|  308|Drosophila melanogaster 26S proteaso...    29   6.4  
AE014134-869|AAF52215.1|  308|Drosophila melanogaster CG18174-PA...    29   6.4  
AY268066-1|AAQ56702.1|  617|Drosophila melanogaster UDP-GalNAc:p...    29   8.4  

>BT022481-1|AAY54897.1|  163|Drosophila melanogaster IP06044p
           protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 437 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 598
           + T LS+D F    C N P   +N   N ++K G+     +   C+DF    +L
Sbjct: 71  TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122


>AE013599-2368|AAF57937.2|  163|Drosophila melanogaster CG6435-PA
           protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +2

Query: 437 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 598
           + T LS+D F    C N P   +N   N ++K G+     +   C+DF    +L
Sbjct: 71  TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122


>AY070977-1|AAL48599.1|  308|Drosophila melanogaster RE07468p
           protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/47 (23%), Positives = 29/47 (61%)
 Frame = -1

Query: 409 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 269
           QT  +LGH     VQ +++ ++   + +++++++     ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220


>AF195189-1|AAF27818.1|  229|Drosophila melanogaster yippee
           interacting protein 5 protein.
          Length = 229

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/47 (23%), Positives = 29/47 (61%)
 Frame = -1

Query: 409 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 269
           QT  +LGH     VQ +++ ++   + +++++++     ++LLN+H+
Sbjct: 95  QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 141


>AF145313-1|AAF08394.1|  308|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p37B protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/47 (23%), Positives = 29/47 (61%)
 Frame = -1

Query: 409 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 269
           QT  +LGH     VQ +++ ++   + +++++++     ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220


>AE014134-869|AAF52215.1|  308|Drosophila melanogaster CG18174-PA
           protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/47 (23%), Positives = 29/47 (61%)
 Frame = -1

Query: 409 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 269
           QT  +LGH     VQ +++ ++   + +++++++     ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220


>AY268066-1|AAQ56702.1|  617|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = +2

Query: 449 LSDDTFLLMPCTNPPAHTSNCYNNS-----IYK-EGRWVANTDSSQCI 574
           +SDD  L    +N P +   C+N       +Y  E +W+ +T+S QC+
Sbjct: 535 MSDDLCLDASSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNSGQCL 582


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,352,571
Number of Sequences: 53049
Number of extensions: 690691
Number of successful extensions: 2538
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2500
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)