Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5660
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 32 0.47
U46668-1|AAA93344.1| 181|Caenorhabditis elegans Hypothetical pr... 31 0.63
AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 29 2.5
Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032637-4|CAA21619.2| 534|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 28 5.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 28 5.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 28 5.8
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 28 5.8
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 28 5.8
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 5.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 25 7.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 25 7.1
U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 28 7.7
AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 569 IATSPCWPPNALLCKCCCCSNYWCVPADWCTASAKTCRPTKMLKKQNCS*DC 414
+A P P A C + WC A W A+++ C+ +++ +Q+C+ C
Sbjct: 479 VAQRPGPPQQASRSGTCADRSSWC--ASWLNANSRVCQISQIYMRQDCARTC 528
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -3
Query: 569 IATSPCWPPNALLCKCCCCSNYWCVPADWCTASAKTCRPTKMLKKQNCS*DC 414
+A P P A C + WC A W A+++ C+ +++ +Q+C+ C
Sbjct: 528 VAQRPGPPQQASRSGTCADRSSWC--ASWLNANSRVCQISQIYMRQDCARTC 577
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 284 EELMYENDLLKMNIELMHAHINKINNMLHDLIVSVAKVDERLIGNLMNNSVSSTFLSD 457
EEL+ D +K+ IE + + +NN+L L S+A + +L+N+ +S+TFLSD
Sbjct: 55 EELLENQDFMKLFIENLSTSL-AMNNVLSFL--SIAMFGKS--SSLLNDDISNTFLSD 107
>U46668-1|AAA93344.1| 181|Caenorhabditis elegans Hypothetical
protein F38E9.6 protein.
Length = 181
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 486 LVHGISKNVSSDKNVEETELFMRLPIKRSSTLATETIRSCSI 361
L G+++N+ + KN E T F L IKR T+R SI
Sbjct: 116 LKRGVARNMYTTKNRENTMKFKLLSIKRRKKTGVTTVRPTSI 157
>AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical
protein F57H12.5 protein.
Length = 543
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = -1
Query: 580 KIYALRRV---RVGHPTPFFVNAVVVAITGVCRRI 485
KIY RV R GH ++NA V+ +T VCRR+
Sbjct: 253 KIYDENRVQLNRPGHEDVNYINASVITLTDVCRRM 287
>Z81595-7|CAB54304.1| 358|Caenorhabditis elegans Hypothetical
protein T22H2.6a protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 554 CWP-PNALLCKCCCC-SNYWCVPADWCTASAKTCR 456
C P NA+ C+ CC + Y CV C AKT R
Sbjct: 309 CCPLSNAICCENTCCPAGYHCVDGGKCEKHAKTMR 343
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 29 RQVKAACLLIKDDKNNPESVTREHCLIDNDIYDLSK 136
+ K A + K+NP+ V R+H LID D+ + K
Sbjct: 329 KDFKCALVWGASAKHNPQRVGRDHVLIDEDVVQVIK 364
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 29 RQVKAACLLIKDDKNNPESVTREHCLIDNDIYDLSK 136
+ K A + K+NP+ V R+H LID D+ + K
Sbjct: 329 KDFKCALVWGASAKHNPQRVGRDHVLIDEDVVQVIK 364
>Z92806-1|CAB07258.1| 802|Caenorhabditis elegans Hypothetical
protein K10G4.1 protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 376 QVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNM 275
+V Q IV +++ R H+L VHF ++ F + L+ +
Sbjct: 224 KVFQDIVEMLEKRHHKLRVHFLEVYFWKRPLIEL 257
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/77 (22%), Positives = 25/77 (32%)
Frame = -3
Query: 680 PLASFPTVVIGCVARMSESKIXXXXXXLVPCSC*NLCIATSPCWPPNALLCKCCCCSNYW 501
P +P+ + C+ + + C + CIA C C C NY
Sbjct: 324 PQQCYPSCDMNCIQQYAVQMAPTPCAAQCMPLCESSCIARLSCVQTCMPACSPTCVQNYA 383
Query: 500 CVPADWCTASAKTCRPT 450
P A C+PT
Sbjct: 384 AGPIQCAPACMPLCQPT 400
>AL032637-4|CAA21619.2| 534|Caenorhabditis elegans Hypothetical
protein Y43F8C.4 protein.
Length = 534
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 242 EGDTATKGDLMHIQEELMYENDLLKMNIELMHAHINKINNMLHDLIVSVAKVD 400
+ TA + + +Q+E E + LK N + ++ + + DL+ V KVD
Sbjct: 204 DSKTAQRAQISKLQDEHHVELERLKANYDRQLENVTSSTSQVGDLVAVVGKVD 256
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 530 CKCCCCSNYWCVPADWCTASAKTCRPTK 447
C CCCC C C +TC T+
Sbjct: 84 CGCCCCRPRCCCCCRRCCTCCRTCCCTR 111
>Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.10 protein.
Length = 673
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 512 YNNSIYKEGRWVANTDSSQCIDFSNYKELA 601
Y+++I K +W N S C+ + NY+ A
Sbjct: 398 YDDAILKNHQWDLNDQQSICVSYCNYEAYA 427
>Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.5 protein.
Length = 673
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 512 YNNSIYKEGRWVANTDSSQCIDFSNYKELA 601
Y+++I K +W N S C+ + NY+ A
Sbjct: 398 YDDAILKNHQWDLNDQQSICVSYCNYEAYA 427
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical protein
F58E6.1a protein.
Length = 966
Score = 28.3 bits (60), Expect = 5.8
Identities = 26/110 (23%), Positives = 43/110 (39%)
Frame = -1
Query: 340 RMHQLNVHFQQIVFVHQLLLNMHQVTFGGSVSFCVLGSNVVAPSGRPFLDLVLDFAFNAS 161
++H+ N + V +N H + GGS S SN + ++V D + +
Sbjct: 810 KIHKWNAIMRNSVLASLKFINKHWLICGGSPSDTPTSSNADCGKAQVTGEIVGDRHYRIN 869
Query: 160 VKLAIPRVFRKIIYIIVDQTVFACHRLGVIFVIFNEQTRSFYLARGERRL 11
V L R K + TV+A +G+ IF L + E +L
Sbjct: 870 VTLIAERDPVKNAKVGATSTVYAVAHIGLKGGIFQYTNALKTLGKPEPKL 919
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 530 CKCCCCSNYWCVPADWCTASAKTCRPTK 447
C CCCC C C +TC T+
Sbjct: 82 CGCCCCRPRCCCCCRRCCTCCRTCCCTR 109
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 530 CKCCCCSNYWCVPADWCTASAKTCRPTK 447
C CCCC C C +TC T+
Sbjct: 83 CGCCCCRPKCCCCCRRCCTCCRTCCCTR 110
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 530 CKCCCCSNYWCVPADWCTASAKTCRPTK 447
C CCCC C C +TC T+
Sbjct: 83 CGCCCCRPRCCCCCRRCCTCCRTCCCTR 110
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 530 CKCCCCSNYWCVPADWCTASAKTCRPTK 447
C CCCC C C +TC T+
Sbjct: 84 CGCCCCRPRCCCCCRRCCTCCRTCCCTR 111
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 395 PWPRKLSGRAAYCLSC*YAHASAQCSFSANRFRTS 291
PW R + A C++C + +C F A FR S
Sbjct: 332 PWGRATANSANSCVACNCNQHAKRCRFDAELFRLS 366
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 395 PWPRKLSGRAAYCLSC*YAHASAQCSFSANRFRTS 291
PW R + A C++C + +C F A FR S
Sbjct: 332 PWGRATANSANSCVACNCNQHAKRCRFDAELFRLS 366
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = -3
Query: 572 CIATSPCWP---PNALLC--KCCCCSNYWCVPADWCTAS 471
CI S C PNA +C + C N WC+P C S
Sbjct: 1799 CICKSACEHVECPNAQVCILRKADCPNKWCLPVPTCEKS 1837
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 25.4 bits (53), Expect(2) = 7.1
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = -3
Query: 593 PC---SC*NLCIATSPCWPPNALLCKCCC 516
PC C LC AT PN L KC C
Sbjct: 1000 PCRASQCTQLCFATPSESHPNELEAKCAC 1028
Score = 20.6 bits (41), Expect(2) = 7.1
Identities = 6/19 (31%), Positives = 8/19 (42%)
Frame = -3
Query: 515 CSNYWCVPADWCTASAKTC 459
C N C+P +W C
Sbjct: 1063 CKNGRCIPKEWKCDGENDC 1081
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 25.4 bits (53), Expect(2) = 7.1
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Frame = -3
Query: 593 PC---SC*NLCIATSPCWPPNALLCKCCC 516
PC C LC AT PN L KC C
Sbjct: 1000 PCRASQCTQLCFATPSESHPNELEAKCAC 1028
Score = 20.6 bits (41), Expect(2) = 7.1
Identities = 6/19 (31%), Positives = 8/19 (42%)
Frame = -3
Query: 515 CSNYWCVPADWCTASAKTC 459
C N C+P +W C
Sbjct: 1063 CKNGRCIPKEWKCDGENDC 1081
>U64833-1|AAB04814.1| 857|Caenorhabditis elegans Hypothetical
protein B0507.6 protein.
Length = 857
Score = 27.9 bits (59), Expect = 7.7
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Frame = +2
Query: 77 PESVTREHCLIDNDIYDLSKNTW--NCKFNRCIKRKV-EHQVKKRPPTWRHNVRAKYTEG 247
P + + H I ND+ + N N ++ EH V P + + N Y +G
Sbjct: 278 PRNTSNSHHEICNDVQSYPGKHYDKNTSSNFVFNFEIDEHPVPITPTSPKQNYEKTYKDG 337
Query: 248 DTATKGDLMHIQ-EELMYENDLLKMNIELMHAHINKINNMLHDL 376
D+ G + I+ E + E+ + N + N IN + DL
Sbjct: 338 DSNQTGGICEIEHSENVVESFEVLENNKKTEYFFNVINELRCDL 381
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 479 CTNP-PAHTSNCYNNSIYKEGRWVANTDSSQCI 574
CTNP P T C NN +V N + QC+
Sbjct: 55 CTNPNPMCTKQCINNVCQCRSGYVRNEITRQCV 87
>AC006775-1|AAF60622.2| 551|Caenorhabditis elegans Hypothetical
protein Y46H3B.2 protein.
Length = 551
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 168 LNAKSSTKSRNGRPLGATTLEPSTQKETLPP 260
+N SS P A T EP+T+ TLPP
Sbjct: 105 MNGDSSIYRNWAHPPDAPTAEPTTEPSTLPP 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,515,997
Number of Sequences: 27780
Number of extensions: 351761
Number of successful extensions: 1316
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1308
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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