Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5660
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.2  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   2.9  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   5.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.1  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   6.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   6.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   6.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   6.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.9  

>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +2

Query: 467 LLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 598
           ++   +N   H +N YNN+ Y       N ++    +++NYK+L
Sbjct: 314 IISSLSNKTIHNNNNYNNNNYNN-----NYNNYNNNNYNNYKKL 352


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 141 VFLERSYISLSIKQCSRVTDSGLFLSS 61
           +FL+ + ++  I +CS ++D+ L + S
Sbjct: 90  IFLDENGVNKLITECSAISDADLAVKS 116


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 141 VFLERSYISLSIKQCSRVTDSGLFL 67
           +FL  + I+  I +CS ++D+ + L
Sbjct: 90  IFLNENEINQLITECSAISDTNVHL 114


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 473 MPCTNPPAHTSNCYNNSI 526
           MPCT PP+   N   N +
Sbjct: 312 MPCTQPPSAPQNLTVNFV 329


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 59  KDDKNNPESVTREHCLIDNDIYDLSKNT 142
           K    N  S TR  C  D+  YD  KN+
Sbjct: 75  KHGLTNTASHTRLSCDCDDKFYDCLKNS 102


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 59  KDDKNNPESVTREHCLIDNDIYDLSKNT 142
           K    N  S TR  C  D+  YD  KN+
Sbjct: 80  KHGLTNTASHTRLSCDCDDKFYDCLKNS 107


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 584 NYKELAIDDDVEFWIPTFGQH 646
           N  ++ I  +++ WIP F  H
Sbjct: 384 NDTKITIPKEMKIWIPAFAIH 404


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -3

Query: 518 CCSNYWCVPADWCTASAKTCRPTKMLKKQNCS*DC 414
           CC         W T  ++ C  +   K++N S  C
Sbjct: 344 CCKTRIIGRRSWVTRESQICNNSSSDKERNSSFKC 378


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 59  KDDKNNPESVTREHCLIDNDIYDLSKNT 142
           K    N  S TR  C  D+  YD  KN+
Sbjct: 80  KHGLTNTASHTRLSCDCDDKFYDCLKNS 107


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +3

Query: 138 TRGIASLTDALNAKSSTKS 194
           T+ +ASLTDA N++ + ++
Sbjct: 458 TKSLASLTDAENSRRAMEN 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,403
Number of Sequences: 438
Number of extensions: 3927
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)