Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-5658
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1393 - 26706198-26706592,26707055-26707301,26707407-267082...    28   5.4  
07_03_1313 - 25708027-25708099,25708633-25708704,25710012-257100...    27   9.4  

>08_02_1393 -
           26706198-26706592,26707055-26707301,26707407-26708249,
           26708420-26709091
          Length = 718

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +1

Query: 442 LLASEVCMLVYNGIFEHD---FDPLQNVGFARNLAYLLRTDDNSI 567
           L+ SE   + + G+ E D   FDP ++  FA  L  L+R DD ++
Sbjct: 630 LIISEKMAIEFVGLCEDDSIYFDPSKDYDFALGLNNLVREDDEAL 674


>07_03_1313 -
           25708027-25708099,25708633-25708704,25710012-25710068,
           25711582-25711832
          Length = 150

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 207 SKRAINKKILIKFQFDP*ITEQLYPIKKPIQKTIY 311
           SK A+N+ IL+ +QF P    + YP++  +  TIY
Sbjct: 85  SKLAVNRYILLNYQFYP-NEFKPYPLRMAMLTTIY 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,763,645
Number of Sequences: 37544
Number of extensions: 218934
Number of successful extensions: 363
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)