Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-5655
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 326 1e-89
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 316 8e-87
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 314 4e-86
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 314 4e-86
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 307 4e-84
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 307 5e-84
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 217 5e-57
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 217 5e-57
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 146 1e-35
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 144 6e-35
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 144 6e-35
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 144 6e-35
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 144 6e-35
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 139 1e-33
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 139 1e-33
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 138 4e-33
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 138 4e-33
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 138 4e-33
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 137 7e-33
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 136 9e-33
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 136 2e-32
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 132 1e-31
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 115 2e-26
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 115 2e-26
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 114 4e-26
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical p... 28 4.5
Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical p... 28 4.5
Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 4.5
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 6.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 326 bits (800), Expect = 1e-89
Identities = 151/179 (84%), Positives = 158/179 (88%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVHIQAGQCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA LVDLEPGTMDSVR+GPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAESCDCLQGFQ KIR+EYPDRIM T+SVVPSPKVSDTV
Sbjct: 121 RKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTV 179
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 316 bits (776), Expect = 8e-87
Identities = 144/179 (80%), Positives = 155/179 (86%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVH+QAGQCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAE CDCLQGFQ KIR+EYPDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 314 bits (770), Expect = 4e-86
Identities = 145/179 (81%), Positives = 154/179 (86%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAES DCLQGFQ KIR+EYPDRIMNT+SVVPSPKVSDTV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 314 bits (770), Expect = 4e-86
Identities = 145/179 (81%), Positives = 154/179 (86%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVHIQAGQCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYV
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVV 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAES DCLQGFQ KIR+EYPDRIMNT+SVVPSPKVSDTV
Sbjct: 121 RKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTV 179
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 307 bits (754), Expect = 4e-84
Identities = 138/179 (77%), Positives = 154/179 (86%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAE CDCLQGFQ KIR+EYPDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTV 179
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 307 bits (753), Expect = 5e-84
Identities = 138/179 (77%), Positives = 154/179 (86%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MREIVH+QAGQCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYV
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRA+LVDLEPGTMDSVRSGPFGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RKEAE CDCLQGFQ KIR+E+PDRIM+++SVVPSPKVSDTV
Sbjct: 121 RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTV 179
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 217 bits (530), Expect = 5e-57
Identities = 97/179 (54%), Positives = 129/179 (72%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+EAE+ D L+GFQ K+R+EY D+ ++T S++PS KVSDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV 179
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 217 bits (530), Expect = 5e-57
Identities = 97/179 (54%), Positives = 129/179 (72%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
M+EI+++Q GQCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYV
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRAILVDL+P +++ VRS +G++F P+N V G+SGAGNNW++G+Y +GAE+VD VL V+
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+EAE+ D L+GFQ K+R+EY D+ ++T S++PS KVSDTV
Sbjct: 121 RREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSDTV 179
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 146 bits (353), Expect = 1e-35
Identities = 66/179 (36%), Positives = 100/179 (55%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 144 bits (348), Expect = 6e-35
Identities = 66/179 (36%), Positives = 101/179 (56%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 144 bits (348), Expect = 6e-35
Identities = 69/179 (38%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
Frame = +3
Query: 75 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYV 251
RE V I GQ G QIG WE+ EHG+D G + + + + + +++E+ GK+V
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHV 65
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PRAI VDLEP +D +R+G +G +F PD + G+ A NN+A+GHYT G EL+D VLD +
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRI 125
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
RK+ E+C+ LQGF ++ E+ + +SV P+P+VS +V
Sbjct: 126 RKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 144 bits (348), Expect = 6e-35
Identities = 65/179 (36%), Positives = 99/179 (55%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G D E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+V V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTAV 179
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 144 bits (348), Expect = 6e-35
Identities = 66/179 (36%), Positives = 101/179 (56%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G S + E ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+VLD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 142 bits (345), Expect = 1e-34
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGK 245
MREIV I GQ G QIG WE+ EHGI P G D+ +E N +++E GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 246 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 425
+VPRAI VDLEP +D VR+G + ++F P+ + G+ A NN+A+GHYT G EL+D V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 426 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDT 605
VR+ E C LQGF ++ +Y + +S+ P+P++S +
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 606 V 608
+
Sbjct: 181 M 181
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 139 bits (337), Expect = 1e-33
Identities = 63/179 (35%), Positives = 99/179 (55%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 139 bits (337), Expect = 1e-33
Identities = 63/179 (35%), Positives = 99/179 (55%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G + + ++++ G+YV
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYV 60
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G EL+D+ LD +
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 RRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAV 179
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 138 bits (333), Expect = 4e-33
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 245
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 246 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 425
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 426 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDT 605
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 606 V 608
V
Sbjct: 181 V 181
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 138 bits (333), Expect = 4e-33
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 245
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 246 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 425
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 426 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDT 605
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 606 V 608
V
Sbjct: 181 V 181
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 138 bits (333), Expect = 4e-33
Identities = 64/181 (35%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 245
MRE++ I GQ G QIG WE+ EHGI P G D L + + +++E G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 246 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 425
+VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 426 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDT 605
+R+ A++C LQGF ++ +Y + +S+ P+P+VS
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 606 V 608
V
Sbjct: 181 V 181
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 137 bits (331), Expect = 7e-33
Identities = 67/181 (37%), Positives = 103/181 (56%), Gaps = 3/181 (1%)
Frame = +3
Query: 75 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGK 245
RE++ I GQ G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGK 66
Query: 246 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 425
+VPR + VDLEP +D VR+G + +F P+ + G+ A N +A+G YT G E++D V+D
Sbjct: 67 HVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMD 126
Query: 426 VVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDT 605
V++ AE+C+ LQGF ++ EY + +++ P+P+VS +
Sbjct: 127 RVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTS 186
Query: 606 V 608
+
Sbjct: 187 M 187
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 136 bits (330), Expect = 9e-33
Identities = 64/183 (34%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +3
Query: 66 NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASG 239
N+ RE++ I GQ G Q+G WE+ EHGI P G + + L ++ N +++E
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMA 63
Query: 240 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 419
GK+VPRAI+VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 420 LDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVS 599
+D VR+ E+C LQGF ++ +Y + + + P+P+VS
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVS 183
Query: 600 DTV 608
++
Sbjct: 184 TSM 186
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 136 bits (328), Expect = 2e-32
Identities = 63/180 (35%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Frame = +3
Query: 75 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 248
RE++ I GQ G QIG WE+ EHGI P G D L + + +++E G++
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 249 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 428
VPRA++VDLEP +D +R+G + +F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 429 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
+R+ A++C LQGF ++ +Y + +S+ P+P+VS V
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 132 bits (320), Expect = 1e-31
Identities = 62/179 (34%), Positives = 101/179 (56%)
Frame = +3
Query: 72 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 251
MRE++ I GQ G QIG WE+ EHGI P G + D + ++++ G++V
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHV 59
Query: 252 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 431
PR+I VDLEP +D +R+G + ++F P+ + G+ A NN+A+GHYT G E++D+ LD +
Sbjct: 60 PRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRI 119
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
R+ A +C+ LQGF ++ EY + +S+ P+P++S +V
Sbjct: 120 RRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTSV 178
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 115 bits (277), Expect = 2e-26
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Frame = +3
Query: 81 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 260
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 261 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 431
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
+EAE+ + L G ++R+ +P +++ TYSV + S V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 115 bits (277), Expect = 2e-26
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
Frame = +3
Query: 81 IVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRA 260
++ + GQCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRA 65
Query: 261 ILVDLEPGTMDSVRSGP-FGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVV 431
+LVDLEP ++ + P F +F DN GAGNNWA G Y +G E+ + ++D++
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 432 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
+EAE+ + L G ++R+ +P +++ TYSV + S V
Sbjct: 125 IREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 114 bits (275), Expect = 4e-26
Identities = 56/156 (35%), Positives = 89/156 (57%), Gaps = 3/156 (1%)
Frame = +3
Query: 150 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQ 320
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+G +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 321 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXX 500
+F P+ + G+ A N +A+G YT G E++D V+D V++ AE+C+ LQGF
Sbjct: 64 LFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGT 123
Query: 501 XXXXXXXXXXKIRKEYPDRIMNTYSVVPSPKVSDTV 608
++ EY + +++ P+P+VS ++
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 159
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -2
Query: 454 SHDSASFRTTSKTESTSSAPSV*CPLAQLL-----PAPDCPKTKLSGRKICPKGPERTES 290
S A R + + S SS+PS CP LL PAP P + G PK +
Sbjct: 294 SDGRAGSRISLASTSASSSPSDPCPSPPLLPPVCPPAPPPPPPPIGGLTSPPKDALKNVP 353
Query: 289 MVPGSKST 266
PG+ T
Sbjct: 354 EPPGNMKT 361
>Z81581-14|CAH10785.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 513 PYRNRCRRRASVSVGIPGGNHTIPLPF 433
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z81581-12|CAB70244.3| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 513 PYRNRCRRRASVSVGIPGGNHTIPLPF 433
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-3|CAH04714.1| 628|Caenorhabditis elegans Hypothetical
protein F08A10.1d protein.
Length = 628
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 513 PYRNRCRRRASVSVGIPGGNHTIPLPF 433
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>Z75534-2|CAA99825.4| 635|Caenorhabditis elegans Hypothetical
protein F08A10.1a protein.
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 513 PYRNRCRRRASVSVGIPGGNHTIPLPF 433
PYR + +RRA +S GG+H PF
Sbjct: 26 PYRQQRKRRAGISGAATGGSHQRDGPF 52
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/72 (26%), Positives = 27/72 (37%)
Frame = -3
Query: 486 ASVSVGIPGGNHTIPLPFERRLKLNRRAQHPPCSVPWPSCYXXXXXXXRSCPDGRSVRKV 307
+S P T+P P+ + A +PP S P+PS + P
Sbjct: 165 SSTPTPYPSSQPTMPTPYPTG---SGAAPYPPSSTPYPSAGAMGYNPYMNVPQSTPYPMG 221
Query: 306 QSGQSPWCRAPS 271
SG SP+ A S
Sbjct: 222 ASGASPYPSASS 233
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 138 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 275
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,107,086
Number of Sequences: 27780
Number of extensions: 267225
Number of successful extensions: 791
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -